Detailed information NTG0909669

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABS742_RS22380
• Genome accession: NZ_CP158445
• Coordinates: 4685541..4686566 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 536
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4680541..4691566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABS742_RS22360 (ABS742_22325)	metJ	4681726..4682043 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABS742_RS22365 (ABS742_22330)	yiiX	4682103..4682711 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
ABS742_RS22370 (ABS742_22335)	rpmE	4682772..4682984 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABS742_RS22375 (ABS742_22340)	priA	4683187..4685385 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
ABS742_RS22380 (ABS742_22345)	cytR	4685541..4686566 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABS742_RS22385 (ABS742_22350)	ftsN	4686658..4687617 (+)	960	WP_000068847.1	cell division protein FtsN	-
ABS742_RS22390 (ABS742_22355)	hslV	4687710..4688240 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABS742_RS22395 (ABS742_22360)	hslU	4688250..4689581 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABS742_RS22400 (ABS742_22365)	menA	4689648..4690574 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABS742_RS22405 (ABS742_22370)	rraA	4690667..4691152 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABS742_RS22410 (ABS742_22375)	zapB	4691237..4691482 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=909669 ABS742_RS22380 WP_000644904.1 4685541..4686566(+) (cytR) [Escherichia coli strain 536]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=909669 ABS742_RS22380 WP_000644904.1 4685541..4686566(+) (cytR) [Escherichia coli strain 536]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628