Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SM123_RS09485 Genome accession   NZ_CP139419
Coordinates   1964565..1965824 (-) Length   419 a.a.
NCBI ID   WP_049482393.1    Uniprot ID   -
Organism   Streptococcus lingualis strain S5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1959565..1970824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM123_RS09470 (SM123_09470) - 1961328..1961615 (-) 288 WP_003016069.1 WXG100 family type VII secretion target -
  SM123_RS09475 (SM123_09475) - 1962093..1962644 (+) 552 WP_023919523.1 hypothetical protein -
  SM123_RS09480 (SM123_09480) - 1962699..1964549 (-) 1851 WP_227038366.1 proline--tRNA ligase -
  SM123_RS09485 (SM123_09485) eeP 1964565..1965824 (-) 1260 WP_049482393.1 RIP metalloprotease RseP Regulator
  SM123_RS09490 (SM123_09490) - 1965861..1966664 (-) 804 WP_320909495.1 phosphatidate cytidylyltransferase -
  SM123_RS09495 (SM123_09495) - 1966674..1967423 (-) 750 WP_049474435.1 isoprenyl transferase -
  SM123_RS09500 (SM123_09500) yajC 1967578..1967904 (-) 327 WP_003004444.1 preprotein translocase subunit YajC -
  SM123_RS09505 (SM123_09505) - 1968061..1968306 (-) 246 WP_003009969.1 hypothetical protein -
  SM123_RS09510 (SM123_09510) - 1968532..1970661 (-) 2130 WP_320909496.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45913.37 Da        Isoelectric Point: 6.9958

>NTDB_id=909560 SM123_RS09485 WP_049482393.1 1964565..1965824(-) (eeP) [Streptococcus lingualis strain S5]
MQFIAFIVIFGVIVLVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGQDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNEAGKVVRINLSGKNLDQTALPMNVTQFDFEDKLEITGLVLDETKTYSVDHDATIVEEDGTEVRIAPRDVQYQ
NASIWGRLITNFAGPMNNFILSIVVYSLLAFMRGGAIDYYSNNVQVAPDGALAKVGVKSNVQILQVNNDTVSNWDELTDA
VEKATKDSKTAPELTLKVKTDGQEKEVKVKPTKSGNRYYLGVTNGLKTGFVDKLLSGFTDTWNTATRILGALKDIIFHFS
LNKLGGPVAIYNASSQAAQLGIPAVLSLMAMLSINIGIFNLIPIPALDGGKILINLIEVVRRKPLKQEVETYMTLAGVAV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=909560 SM123_RS09485 WP_049482393.1 1964565..1965824(-) (eeP) [Streptococcus lingualis strain S5]
ATGCAGTTTATTGCCTTTATTGTTATTTTTGGAGTGATCGTTCTCGTTCACGAGTTTGGTCATTTCTATTTTGCAAAAAA
ATCGGGCATCCTGGTGCGAGAATTCTCGATCGGGATGGGTCCAAAGATCTTTGCCCATATTGGTCAAGATGGAACAGCTT
ATACCATTCGCATTCTACCTTTAGGTGGCTATGTGCGTATGGCTGGCTGGGGTGAGGACACAACTGAGATTAAAACCGGA
ACGCCTGTCAGCTTGACGCTAAATGAGGCTGGTAAGGTCGTCCGGATCAATCTTTCAGGAAAGAATCTGGATCAGACAGC
CCTTCCTATGAATGTCACCCAGTTTGACTTTGAAGACAAACTGGAAATTACGGGCTTGGTTCTCGATGAGACCAAGACCT
ATAGTGTTGATCATGATGCGACCATCGTTGAGGAAGATGGGACGGAAGTGCGGATTGCACCGAGAGATGTTCAGTATCAG
AATGCCAGCATTTGGGGACGGTTGATCACCAACTTTGCGGGTCCTATGAACAACTTTATCCTCAGTATTGTCGTCTATTC
ACTCTTAGCCTTTATGCGCGGTGGTGCGATTGACTACTACAGCAACAATGTTCAGGTGGCACCTGATGGGGCGTTGGCTA
AGGTCGGTGTCAAAAGCAATGTTCAGATCCTTCAAGTCAACAACGACACCGTTAGCAACTGGGATGAGCTGACAGACGCT
GTTGAGAAAGCAACCAAGGACAGCAAGACGGCTCCTGAATTGACCCTGAAGGTCAAGACAGACGGCCAAGAAAAAGAAGT
CAAAGTGAAGCCAACTAAGTCAGGGAATCGTTACTATTTGGGTGTGACAAATGGCCTCAAGACAGGATTTGTGGATAAAC
TCTTGTCTGGTTTTACAGATACCTGGAATACAGCGACACGGATTTTGGGAGCTTTGAAAGATATCATTTTCCACTTTAGT
CTCAATAAACTGGGTGGACCGGTTGCTATCTACAATGCCAGCTCACAAGCTGCTCAATTAGGGATTCCAGCAGTCTTGTC
TCTTATGGCCATGCTCTCTATTAATATTGGGATCTTCAATCTAATCCCGATTCCAGCTTTGGATGGAGGAAAAATCTTGA
TCAATTTGATCGAGGTCGTCCGGAGAAAGCCATTGAAACAAGAAGTAGAAACCTATATGACACTTGCAGGTGTAGCTGTA
ATGGTTATTTTGATGATTGCTGTCACCTGGAATGATATTATGAAATTATTTTTGAAATAG

Domains


Predicted by InterproScan.

(5-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.106

99.284

0.656

  eeP Streptococcus thermophilus LMD-9

65.865

99.284

0.654