Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SM121_RS00670 Genome accession   NZ_CP139418
Coordinates   145465..146727 (-) Length   420 a.a.
NCBI ID   WP_320910953.1    Uniprot ID   -
Organism   Streptococcus dentalis strain S1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 140465..151727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM121_RS00655 (SM121_00655) - 142229..142516 (-) 288 WP_155127265.1 WXG100 family type VII secretion target -
  SM121_RS00660 (SM121_00660) - 142993..143544 (+) 552 WP_155127262.1 hypothetical protein -
  SM121_RS00665 (SM121_00665) - 143599..145449 (-) 1851 WP_155127259.1 proline--tRNA ligase -
  SM121_RS00670 (SM121_00670) eeP 145465..146727 (-) 1263 WP_320910953.1 RIP metalloprotease RseP Regulator
  SM121_RS00675 (SM121_00675) - 146764..147567 (-) 804 WP_023919527.1 phosphatidate cytidylyltransferase -
  SM121_RS00680 (SM121_00680) - 147577..148326 (-) 750 WP_320910954.1 isoprenyl transferase -
  SM121_RS00685 (SM121_00685) yajC 148481..148807 (-) 327 WP_003004444.1 preprotein translocase subunit YajC -
  SM121_RS00690 (SM121_00690) - 148964..149209 (-) 246 WP_003004069.1 hypothetical protein -
  SM121_RS00695 (SM121_00695) - 149434..151563 (-) 2130 WP_320910955.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 46012.51 Da        Isoelectric Point: 6.9958

>NTDB_id=909461 SM121_RS00670 WP_320910953.1 145465..146727(-) (eeP) [Streptococcus dentalis strain S1]
MQFIAFIVIFGVIVLVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGQDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNEAGKVVRINLSGKNLDQTALPMNVTQFDFEDKLEITGLVLDETKTYSVDHDATIVEEDGTEVRIAPRDVQYQ
NASIWGRLITNFAGPMNNFILSIVVYSLLAFMRGGAIDYYSNNVQVAPDGALAKVVGVKSNVQILQVNNDTVSNWDELTD
AVEKATKDSKTAPELTLKVKTDGQEKEVKVKPTKSGNRYYLGVTNGLKTGFVDKLLSGFTDTWNTATRILGALKDIIFHF
SLNKLGGPVAIYNASSQAAQLGIPAVLSLMAMLSINIGIFNLIPIPALDGGKILINLIEVVRRKPLKQEVETYMTLAGVA
VMVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=909461 SM121_RS00670 WP_320910953.1 145465..146727(-) (eeP) [Streptococcus dentalis strain S1]
ATGCAGTTTATTGCCTTTATTGTTATTTTTGGAGTGATCGTTCTCGTTCACGAGTTTGGTCATTTCTATTTTGCAAAAAA
ATCGGGCATCCTGGTGCGAGAATTCTCGATCGGGATGGGTCCCAAGATCTTTGCCCATATTGGTCAAGATGGAACAGCTT
ATACGATTCGCATTCTACCTTTAGGTGGTTATGTGCGTATGGCTGGCTGGGGTGAGGATACAACTGAGATTAAAACCGGA
ACGCCTGTCAGCTTGACGCTAAATGAGGCTGGTAAGGTCGTCCGGATCAATCTTTCAGGAAAGAATCTGGATCAGACAGC
CCTTCCCATGAATGTTACCCAGTTTGACTTTGAAGACAAACTGGAAATTACGGGCTTGGTTCTCGATGAGACCAAGACCT
ATAGTGTTGATCATGATGCGACCATCGTTGAGGAAGATGGGACAGAAGTGCGGATTGCGCCGAGAGATGTTCAGTATCAG
AATGCCAGCATTTGGGGACGGTTGATCACCAACTTTGCGGGTCCTATGAACAACTTTATCCTCAGTATTGTCGTCTATTC
ACTCTTAGCTTTTATGCGTGGTGGTGCGATTGACTACTACAGCAACAATGTTCAGGTGGCACCTGATGGGGCGCTGGCTA
AGGTCGTCGGTGTCAAAAGCAATGTTCAGATCCTTCAAGTCAACAACGATACCGTTAGCAACTGGGATGAGCTGACAGAT
GCTGTCGAGAAAGCAACCAAGGACAGCAAGACGGCTCCTGAATTGACCCTGAAAGTCAAAACAGACGGCCAAGAAAAAGA
AGTCAAAGTGAAGCCAACCAAGTCAGGGAATCGTTACTATCTGGGTGTGACAAATGGCCTCAAGACAGGATTTGTGGATA
AACTCTTGTCTGGTTTTACAGATACCTGGAATACAGCGACACGGATTCTTGGAGCTTTGAAAGATATCATTTTCCACTTT
AGTCTCAATAAACTGGGTGGTCCGGTCGCTATTTACAATGCCAGCTCACAAGCTGCTCAATTAGGTATTCCAGCAGTCTT
ATCTCTTATGGCCATGCTCTCTATTAATATTGGGATCTTCAATCTAATCCCGATTCCCGCTTTGGATGGTGGGAAAATCT
TGATCAATTTGATCGAGGTCGTCCGGAGAAAGCCACTGAAACAGGAAGTAGAAACCTATATGACGCTTGCAGGTGTAGCT
GTAATGGTTATTTTAATGATTGCTGTCACCTGGAATGATATTATGAAATTATTTTTGAAATAG

Domains


Predicted by InterproScan.

(5-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.427

99.286

0.66

  eeP Streptococcus thermophilus LMD-9

66.187

99.286

0.657