Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SMG00_RS20655 Genome accession   NZ_CP139417
Coordinates   4430258..4430665 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain H46     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4425258..4435665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMG00_RS20635 - 4426205..4427071 (-) 867 WP_020305671.1 protein-glutamate O-methyltransferase CheR -
  SMG00_RS20640 - 4427132..4429191 (-) 2060 Protein_4063 methyl-accepting chemotaxis protein -
  SMG00_RS20645 - 4429270..4429806 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  SMG00_RS20650 pilH 4429848..4430213 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  SMG00_RS20655 pilG 4430258..4430665 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  SMG00_RS20660 gshB 4430902..4431852 (+) 951 WP_013984318.1 glutathione synthase -
  SMG00_RS20665 - 4431940..4432833 (+) 894 WP_019405529.1 energy transducer TonB -
  SMG00_RS20670 - 4432899..4433468 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  SMG00_RS20675 ruvX 4433465..4433893 (+) 429 WP_279642486.1 Holliday junction resolvase RuvX -
  SMG00_RS20680 pyrR 4433911..4434426 (+) 516 WP_011914963.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SMG00_RS20685 - 4434480..4435496 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=909449 SMG00_RS20655 WP_003282729.1 4430258..4430665(-) (pilG) [Stutzerimonas stutzeri strain H46]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=909449 SMG00_RS20655 WP_003282729.1 4430258..4430665(-) (pilG) [Stutzerimonas stutzeri strain H46]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4