Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SM130_RS01410 Genome accession   NZ_CP139348
Coordinates   319007..319414 (+) Length   135 a.a.
NCBI ID   WP_003286242.1    Uniprot ID   A0A1S8EY13
Organism   Stutzerimonas stutzeri strain KC     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 314007..324414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM130_RS01380 (SM130_01380) - 314170..315186 (-) 1017 WP_102824054.1 aspartate carbamoyltransferase catalytic subunit -
  SM130_RS01385 (SM130_01385) pyrR 315245..315757 (-) 513 WP_102824055.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SM130_RS01390 (SM130_01390) ruvX 315779..316207 (-) 429 WP_102824056.1 Holliday junction resolvase RuvX -
  SM130_RS01395 (SM130_01395) - 316204..316773 (-) 570 WP_102824057.1 YqgE/AlgH family protein -
  SM130_RS01400 (SM130_01400) - 316838..317731 (-) 894 WP_102824058.1 energy transducer TonB -
  SM130_RS01405 (SM130_01405) gshB 317819..318769 (-) 951 WP_102824059.1 glutathione synthase -
  SM130_RS01410 (SM130_01410) pilG 319007..319414 (+) 408 WP_003286242.1 twitching motility response regulator PilG Regulator
  SM130_RS01415 (SM130_01415) pilH 319458..319823 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  SM130_RS01420 (SM130_01420) - 319865..320401 (+) 537 WP_102824060.1 chemotaxis protein CheW -
  SM130_RS01425 (SM130_01425) - 320478..322526 (+) 2049 WP_102824061.1 methyl-accepting chemotaxis protein -
  SM130_RS01430 (SM130_01430) - 322588..323454 (+) 867 WP_102824616.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14854.27 Da        Isoelectric Point: 7.2439

>NTDB_id=909021 SM130_RS01410 WP_003286242.1 319007..319414(+) (pilG) [Stutzerimonas stutzeri strain KC]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=909021 SM130_RS01410 WP_003286242.1 319007..319414(+) (pilG) [Stutzerimonas stutzeri strain KC]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTAGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGATATCAGACCTGCGCGTTGATCAAGAACAACAGCTCCTTCAAG
TCAACGCCGGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAAGGGCGTATTGTCGGCTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCACATGTCCCTGATTTCGTACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S8EY13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4