Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   SOI74_RS03665 Genome accession   NZ_CP139287
Coordinates   810671..815176 (-) Length   1501 a.a.
NCBI ID   WP_182917802.1    Uniprot ID   A0A6S4UHJ1
Organism   Acinetobacter pittii strain 564U     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 805671..820176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI74_RS03635 (SOI74_03635) - 805994..806362 (-) 369 WP_032005984.1 YbaN family protein -
  SOI74_RS03640 (SOI74_03640) - 806466..807347 (+) 882 WP_068555850.1 DUF1853 family protein -
  SOI74_RS03645 (SOI74_03645) - 807471..807614 (+) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  SOI74_RS03650 (SOI74_03650) dapE 807741..808877 (+) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  SOI74_RS03655 (SOI74_03655) - 809013..809894 (-) 882 WP_032052670.1 alpha/beta fold hydrolase -
  SOI74_RS03660 (SOI74_03660) - 810204..810671 (-) 468 WP_032005987.1 hypothetical protein -
  SOI74_RS03665 (SOI74_03665) chpA 810671..815176 (-) 4506 WP_182917802.1 hybrid sensor histidine kinase/response regulator Regulator
  SOI74_RS03670 (SOI74_03670) pilJ 815324..817402 (-) 2079 WP_182917801.1 methyl-accepting chemotaxis protein -
  SOI74_RS03675 (SOI74_03675) pilI 817445..817981 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI74_RS03680 (SOI74_03680) pilH 818042..818404 (-) 363 WP_002116220.1 response regulator -
  SOI74_RS03685 (SOI74_03685) pilG 818427..818810 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI74_RS03690 (SOI74_03690) - 819094..819732 (+) 639 WP_033850745.1 hypothetical protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171394.64 Da        Isoelectric Point: 4.3937

>NTDB_id=908786 SOI74_RS03665 WP_182917802.1 810671..815176(-) (chpA) [Acinetobacter pittii strain 564U]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEVFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETYDLEPESTEVLTILTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEVSLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMRPHGLVSQLLQLDVAELLDAELDFENGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESFETHQDVVESLFNA
EVELTANDPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIVSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTELNLSELTSGSEQITESSNQLVEQTELQVLYADHDYTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDLPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTSEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=908786 SOI74_RS03665 WP_182917802.1 810671..815176(-) (chpA) [Acinetobacter pittii strain 564U]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAGTTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGGGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTCATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAACATATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTT
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAGTTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCGTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAATGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAATCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGACTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCCGCAGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGACGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTTGAAACTCATCAAGACGTTGTTGAATCATTGTTTAATGCT
GAAGTTGAACTAACAGCGAATGATCCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCATCTGAGCATGTAAACCGTCATTTTGATCCAGACCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGTGTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAGTTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGAGTTAAACCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTACTGAGT
CCAGTAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATTATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTAGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGCCTTATGCGAACACGCTTAGTACCATTCTCTCGATTGTTGCCTCGTCTCCAAAGA
ATTGTGAGGCAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTCGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGCTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGATTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAAGACGATGGACAAGGTATTGATATCGAAAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTGACTCAGATCTCAGGTC
GTGGCGTAGGGCTGGATGTCGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATATGGGCAG
GGAACTGTCTTTACTATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATTCCATTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGTTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAACTATCTATAGACAACGCGAGTCTGACGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCCATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCACGAATGGATGGCTTTGAGGTACTTAACCTC
GTTCGACATCATGATCTACATCAAGATCTGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATCTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.749

100

0.803