Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   SOI79_RS11070 Genome accession   NZ_CP139266
Coordinates   2291575..2296080 (+) Length   1501 a.a.
NCBI ID   WP_057061989.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HUM14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2286575..2301080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI79_RS11045 (SOI79_11045) - 2287018..2287656 (-) 639 WP_017400247.1 hypothetical protein -
  SOI79_RS11050 (SOI79_11050) pilG 2287941..2288324 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI79_RS11055 (SOI79_11055) pilH 2288347..2288709 (+) 363 WP_002116220.1 response regulator -
  SOI79_RS11060 (SOI79_11060) pilI 2288770..2289306 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI79_RS11065 (SOI79_11065) pilJ 2289349..2291427 (+) 2079 WP_032036912.1 methyl-accepting chemotaxis protein -
  SOI79_RS11070 (SOI79_11070) chpA 2291575..2296080 (+) 4506 WP_057061989.1 hybrid sensor histidine kinase/response regulator Regulator
  SOI79_RS11075 (SOI79_11075) - 2296080..2296547 (+) 468 WP_057061990.1 hypothetical protein -
  SOI79_RS11080 (SOI79_11080) - 2296848..2297246 (+) 399 Protein_2139 alpha/beta fold hydrolase -
  SOI79_RS11085 (SOI79_11085) - 2297298..2298230 (-) 933 WP_005064486.1 IS5 family transposase -
  SOI79_RS11090 (SOI79_11090) dapE 2298393..2299529 (-) 1137 WP_005064372.1 succinyl-diaminopimelate desuccinylase -
  SOI79_RS11095 (SOI79_11095) - 2299656..2299799 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  SOI79_RS11100 (SOI79_11100) - 2299923..2300804 (-) 882 WP_057061992.1 DUF1853 family protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171116.34 Da        Isoelectric Point: 4.4242

>NTDB_id=908542 SOI79_RS11070 WP_057061989.1 2291575..2296080(+) (chpA) [Acinetobacter pittii strain HUM14]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLNEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPDIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTISTSEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEVSLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANDPVIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVDDQENFAAINNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTALSLSELTSGSEQIAKSNNQLVEQTELQVLYADHNHTESIPDQ
DINSVVEQTFMEEAAELLELADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAKKPEAGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SFNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTSEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=908542 SOI79_RS11070 WP_057061989.1 2291575..2296080(+) (chpA) [Acinetobacter pittii strain HUM14]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTAATGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTTGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTGACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAACAAATGACTTAGAACCAGAATCAACAGAAGTTTTAACTATTTC
GACTTCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAGTTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTAGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTGTTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAGTTAGATTTTGAGAAGGGTATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACACACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCCGCAGGACAAAGAGTAAGTATCATCGAGCAACACCAAAATGTCTTGGACGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCTTTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACAGCGAATGATCCTGTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCATCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTGATGATCAAGAAAACTTTGCCGCTATCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATACAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAGCCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACAATCATACAGAGAGTATCCCAGATCAG
GATATTAACTCTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAGTTGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCGGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAGCTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCGTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACGTTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTCATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTACAAAGA
ATTGTGAGACAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTCTTCGTGAATAATACTGAAGGTGAGCTAGACCGGAC
AATGTTAGAACGTTTGGTCACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGTTTAGAAGACCGTGCGCAAC
GTGAACAAGCTAAAAAACCAGAAGCGGGACGCATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGACGATGGACAAGGTATTGATATCGAAAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTAACTCAGATCTCAGGTC
GTGGCGTAGGGCTGGATGTCGTGCAAAGTGATATTAAGGCTTTAGGTGGCCATGTGAGTGTCGACTCTGTATATGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGCTCTTTGAATTTGAAAATAAGCGTTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACT
AATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGTTTAATGAAACTATCTATAGACAACGTGAGTCTGACGAACGACGTCTTATTATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCGATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCACGAATGGATGGCTTTGAGGTACTTAATCTC
GTTCGACATCATGATCTACATCAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATCTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.722

100

0.801