Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   SOI76_RS03295 Genome accession   NZ_CP139249
Coordinates   682848..687353 (+) Length   1501 a.a.
NCBI ID   WP_104079886.1    Uniprot ID   -
Organism   Acinetobacter pittii strain MCR8900     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 677848..692353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI76_RS03270 (SOI76_03270) - 678291..678929 (-) 639 WP_205668429.1 hypothetical protein -
  SOI76_RS03275 (SOI76_03275) pilG 679214..679597 (+) 384 WP_032056413.1 twitching motility response regulator PilG Regulator
  SOI76_RS03280 (SOI76_03280) pilH 679620..679982 (+) 363 WP_002116220.1 response regulator -
  SOI76_RS03285 (SOI76_03285) pilI 680043..680579 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI76_RS03290 (SOI76_03290) pilJ 680622..682700 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  SOI76_RS03295 (SOI76_03295) chpA 682848..687353 (+) 4506 WP_104079886.1 hybrid sensor histidine kinase/response regulator Regulator
  SOI76_RS03300 (SOI76_03300) - 687353..687820 (+) 468 WP_205668428.1 hypothetical protein -
  SOI76_RS03305 (SOI76_03305) - 688044..689435 (+) 1392 Protein_631 coproporphyrinogen-III oxidase family protein -
  SOI76_RS03310 (SOI76_03310) - 689443..690324 (+) 882 WP_104079885.1 alpha/beta fold hydrolase -
  SOI76_RS03315 (SOI76_03315) dapE 690460..691596 (-) 1137 WP_104079884.1 succinyl-diaminopimelate desuccinylase -
  SOI76_RS03320 (SOI76_03320) - 691723..691866 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171274.56 Da        Isoelectric Point: 4.4521

>NTDB_id=908288 SOI76_RS03295 WP_104079886.1 682848..687353(+) (chpA) [Acinetobacter pittii strain MCR8900]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENIATLTEIRRHFHTLKGSGRMSGAKSSA
ELAWTVEDTLNRVINQSLGLTSHIQQYIQLVFKFYFFKLVDDFKSKKVHTLDFRSLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETKDLQPESTEVLTISTPEVALETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNCLDSLATHCSTEQLEADLQKFNQIWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQYIPDLNSESLETHQDVFESLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQQNFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIKKQLIASPGFIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKEVQAESETYVIHEVNFVELPQEAINNTALSFSELASGSEQITESNNQFVEQTELQVLYADQGYTENLQEQ
DINSVVEQTFMEEAAELLETADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGAWE
QTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINAEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSTQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIHSTHRHK
SLNEAIYRQRVSDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=908288 SOI76_RS03295 WP_104079886.1 682848..687353(+) (chpA) [Acinetobacter pittii strain MCR8900]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTTGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATA
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGAGTGGCGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTTGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTTCTCACATCCAACAATA
TATTCAGTTAGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAGTTCATACCTTAGACTTTA
GGTCCCTCATTTTATTGGGACAACAATTACAACAACAGCAAAGTATAGAACCCGCGCTAGACGAACTTTTATTATTATCA
GATATTCTTACAGCTGAAACTCAAACTGGTTTAGAAACAAAAGACTTGCAACCCGAATCAACTGAAGTTCTAACTATTTC
GACTCCAGAAGTTGCTCTAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACG
TTACGCGGCAGCTCGGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAATTTCATTACTTCGTGATTATCGTCAGTTTATTCGAAATTGTTTAG
ATTCATTGGCTACCCATTGTTCTACTGAGCAATTGGAAGCTGATCTACAAAAATTTAATCAGATTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCAAGCCCGCTCATGCCTCCACATGGTTTAGTGTCTCAGCTGTTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAGTTAGATTTTGAGAAGGGTATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCGGATTATATTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCCTTAGCTGCGGGGCAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGAAGAGCTAAAAC
TATATACTCAATATATTCCAGATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGAATCATTGTTTAATGCT
GAAGTTGAACAAACAGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACTATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAACAGAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTAAAAAACAATTAATAGCTTCGCCTGGTTTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTTTGCAAATAGTACGTGAACAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAAAAT
GCAGGTCAAGTATTTGATTCTCATATTAAAGAAGTGCAAGCAGAATCTGAAACCTATGTTATACATGAAGTAAATTTTGT
AGAATTACCGCAAGAAGCGATAAATAATACAGCGTTAAGCTTCAGTGAGTTAGCTTCTGGTTCTGAGCAGATTACTGAAT
CTAATAATCAATTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGACCAAGGCTATACAGAAAATCTTCAAGAGCAA
GATATTAATTCTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCTGAACTATTAGAAACGGCCGATCATCTATTAAAACA
ATGGTTCGAGCAGCGTACTAACCGTAGTATCTTGCTTCAGCTACAAAGGGCTGTGCATAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCACTTCATCATTTCAGC
TCAAATATTTACGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCTATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATTCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTCGAACTG
ATCTATTCAGCACAGAACCTGTAATGAGTTTTGTACAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGCGTGGGAA
CAAACACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
CGAAAATTCAATTAACCGTTCACGAATTGAAATGGATTTAAGCCAGTTTGGCCATACTCTTGCAGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGCCGAATGGAAGGTGAATTAGAAACTCAAATTATTGCAAAACACGGTATTGAAAAC
TCTCGGTATACGGAATTTGATCCTTTAGAGATGGATCAATATTCTTCATTAAACCAGTTGTCAAAATCTCTTGCCGAATC
TGCATCAGATTTAGTGGATTTTAAAAATACATTATCTGAAAAGATCAGAGATACAGAGGGGTTATTGGTACAGCAATCTC
GTATTCAGGCTGAAATTCAAGAAGGTCTCATGCGAACACGCTTAGTACCATTCTCTCGATTGCTACCTCGTTTACAACGA
ATTGTGAGGCAGACTTCTACTGCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACTGAGGGTGAGCTAGATCGGAC
AATGTTAGAGCGTTTGGTCACACCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGTTTAGAAGACCGTGCGCAAC
GTGAACAAGCTCAAAAACCAGAAACTGGACGCATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTCGTTACATTT
AAGGATGATGGACAAGGAATTGATATCGAGAAGGTTCGTCAAAAGGCATTAATGTCTGGTTTGATTAACGCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGCACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTAGATGTAGTACAAAGTGATATTAAAGCCTTAGGTGGCCACGTGAGCGTCGACTCTGTCTATGGGCAG
GGCACTGTCTTTACCATACGTGTTCCAACTACGGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCATTGGCTCAAATTGATCGCATTGTACGGGTTTCACCAGCCTCATTAGAACAATATTTCGGAAGTACACAAG
AGTTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCCATTCCGCGTTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAAGCAAATAATGGACAAACTGTTGCATTATTAGTTGACCAACT
GATTGGCTCACGTGCGCAGATTGTAGTTAAACCAATCGGACAGCAATTCTCTAGTATTGGGGCGATTGCGGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATCCACTCTACTCACCGACATAAG
TCGCTCAATGAAGCTATTTATAGACAACGTGTGTCTGACGAACGCCGTCTCATCATGATTGTAGATGACTCGGTAACTGT
GCGTAAGGTAACGTCTCGATTACTTGAACGTCAGGGCTATGATGTAGTCACCGCTAAAGATGGGGTCGATGCAATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGCTGCTTGATATTGAAATGCCGCGCATGGATGGCTTTGAGGTTCTCAATCTT
GTTCGACATCATGATCTACATCAAGATATGCCAGTCATCATGATTACTTCAAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTGAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAACATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.722

100

0.801