Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NC3_RS05585 Genome accession   NZ_AP025264
Coordinates   1117100..1117297 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain NC3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1112100..1122297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NC3_RS05555 (NC3_10370) - 1112500..1112679 (+) 180 WP_008348517.1 YjzC family protein -
  NC3_RS05560 (NC3_10380) - 1112849..1114114 (+) 1266 WP_007499050.1 MFS transporter -
  NC3_RS05565 (NC3_10390) - 1114234..1114428 (-) 195 WP_008348514.1 YjzD family protein -
  NC3_RS05570 (NC3_10400) - 1114641..1115381 (+) 741 WP_007499048.1 hypothetical protein -
  NC3_RS05575 (NC3_10410) - 1115457..1116032 (+) 576 WP_076821881.1 nad binding enzyme -
  NC3_RS05580 (NC3_10420) med 1116123..1117088 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  NC3_RS05585 (NC3_10430) comZ 1117100..1117297 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NC3_RS05590 (NC3_10450) - 1117501..1117734 (-) 234 WP_008348506.1 hypothetical protein -
  NC3_RS05595 (NC3_10460) - 1117904..1118842 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NC3_RS05600 (NC3_10470) fabF 1118864..1120105 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  NC3_RS05605 (NC3_10480) - 1120183..1120977 (+) 795 WP_076821877.1 DUF2268 domain-containing protein -
  NC3_RS05610 (NC3_10490) - 1121148..1122128 (+) 981 WP_039963422.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=90809 NC3_RS05585 WP_008348507.1 1117100..1117297(+) (comZ) [Bacillus altitudinis strain NC3]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=90809 NC3_RS05585 WP_008348507.1 1117100..1117297(+) (comZ) [Bacillus altitudinis strain NC3]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment