Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NC3_RS05580 Genome accession   NZ_AP025264
Coordinates   1116123..1117088 (+) Length   321 a.a.
NCBI ID   WP_017360174.1    Uniprot ID   A0A6I5SIG8
Organism   Bacillus altitudinis strain NC3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111123..1122088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NC3_RS05550 (NC3_10360) argF 1111446..1112396 (+) 951 WP_116306708.1 ornithine carbamoyltransferase -
  NC3_RS05555 (NC3_10370) - 1112500..1112679 (+) 180 WP_008348517.1 YjzC family protein -
  NC3_RS05560 (NC3_10380) - 1112849..1114114 (+) 1266 WP_007499050.1 MFS transporter -
  NC3_RS05565 (NC3_10390) - 1114234..1114428 (-) 195 WP_008348514.1 YjzD family protein -
  NC3_RS05570 (NC3_10400) - 1114641..1115381 (+) 741 WP_007499048.1 hypothetical protein -
  NC3_RS05575 (NC3_10410) - 1115457..1116032 (+) 576 WP_076821881.1 nad binding enzyme -
  NC3_RS05580 (NC3_10420) med 1116123..1117088 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  NC3_RS05585 (NC3_10430) comZ 1117100..1117297 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NC3_RS05590 (NC3_10450) - 1117501..1117734 (-) 234 WP_008348506.1 hypothetical protein -
  NC3_RS05595 (NC3_10460) - 1117904..1118842 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NC3_RS05600 (NC3_10470) fabF 1118864..1120105 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  NC3_RS05605 (NC3_10480) - 1120183..1120977 (+) 795 WP_076821877.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35889.89 Da        Isoelectric Point: 5.9297

>NTDB_id=90808 NC3_RS05580 WP_017360174.1 1116123..1117088(+) (med) [Bacillus altitudinis strain NC3]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=90808 NC3_RS05580 WP_017360174.1 1116123..1117088(+) (med) [Bacillus altitudinis strain NC3]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGATGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGTGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I5SIG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632

Multiple sequence alignment