Detailed information NTG0090808

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK32_RS14730
• Genome accession: NZ_AP027829
• Coordinates: 3009562..3010587 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2017.17.03CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3004562..3015587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK32_RS14700 (VEE61_28350)	zapB	3004646..3004891 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AABK32_RS14705 (VEE61_28360)	rraA	3004976..3005461 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK32_RS14710 (VEE61_28370)	menA	3005554..3006480 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK32_RS14715 (VEE61_28380)	hslU	3006547..3007878 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK32_RS14720 (VEE61_28390)	hslV	3007888..3008418 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK32_RS14725 (VEE61_28400)	ftsN	3008511..3009470 (-)	960	WP_000068828.1	cell division protein FtsN	-
AABK32_RS14730 (VEE61_28410)	cytR	3009562..3010587 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK32_RS14735 (VEE61_28420)	priA	3010743..3012941 (-)	2199	WP_089078856.1	primosomal protein N'	Machinery gene
AABK32_RS14740 (VEE61_28430)	rpmE	3013144..3013356 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK32_RS14745 (VEE61_28440)	yiiX	3013417..3014025 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK32_RS14750 (VEE61_28450)	metJ	3014209..3014526 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=90808 AABK32_RS14730 WP_000644904.1 3009562..3010587(-) (cytR) [Escherichia coli strain 2017.17.03CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=90808 AABK32_RS14730 WP_000644904.1 3009562..3010587(-) (cytR) [Escherichia coli strain 2017.17.03CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628