Detailed information NTG0908076

Bioinformatically predicted

Overview

• Name: comFA/cflA
• Type: Machinery gene
• Locus tag: SON02_RS08375
• Genome accession: NZ_CP139211
• Coordinates: 1909272..1910591 (+)
• Length: 439 a.a.
• NCBI ID: WP_135029335.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1904272..1915591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS08355 (SON02_08335)	-	1904685..1905044 (+)	360	WP_135029341.1	S1 RNA-binding domain-containing protein	-
SON02_RS08360 (SON02_08340)	cysK	1905277..1906197 (-)	921	WP_135029339.1	cysteine synthase A	-
SON02_RS08365 (SON02_08345)	-	1907639..1908400 (-)	762	WP_135029338.1	trypsin-like serine protease	-
SON02_RS08370 (SON02_08350)	-	1908573..1909205 (-)	633	WP_135029336.1	YigZ family protein	-
SON02_RS08375 (SON02_08355)	comFA/cflA	1909272..1910591 (+)	1320	WP_135029335.1	DEAD/DEAH box helicase	Machinery gene
SON02_RS08380 (SON02_08360)	-	1910557..1911222 (+)	666	WP_135029334.1	ComF family protein	-
SON02_RS08385 (SON02_08365)	hpf	1911299..1911841 (+)	543	WP_135029331.1	ribosome hibernation-promoting factor, HPF/YfiA family	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 49714.20 Da
• Isoelectric Point: 7.2988

>NTDB_id=908076 SON02_RS08375 WP_135029335.1 1909272..1910591(+) (comFA/cflA) [Streptococcus sp. LysM4]
MTDLANYYGRLFTYHQLTEEERMQATKLASQTADKACFRCSTIFDAKHCLPAGAIYCRECILLGRVRTDEDLYSFPQQAF
PRQKSLKWQGQLTVWQQEISDILRQHLNARTATLVHAVTGAGKTEMIYQVVADVIDAGGAVCLASPRIDVCIELYRRLQE
DFACPISLLHGAGEAYFRTPLVIATTHQLLKFYRAFDLVLIDEVDAFPYTDNPVLYRAVENAVKEDGVTMFLTATSTDKL
EQKVRAGSLHRLRLPRRFHGNPLVVPQKVWLAHFENSLKKNKIVPKLLKKIANQQQTGFPLLLFLPEIQMGHHFAQLLEG
NFPDESIGFVSSQTENRFEIVEQFRKKEISILITTTILERGITFPCIDVFVVNANHHLYTSSSLIQIAGRVGRSMERPTG
EVLFFQDGTNHAIEKAIQEIRLMNEEAGYGNMSIMSANA

Nucleotide

• Length: 1320 bp

>NTDB_id=908076 SON02_RS08375 WP_135029335.1 1909272..1910591(+) (comFA/cflA) [Streptococcus sp. LysM4]
ATGACGGATCTAGCAAATTACTACGGACGATTGTTTACTTATCACCAACTAACAGAAGAAGAACGCATGCAAGCCACGAA
ACTAGCAAGTCAGACAGCTGATAAGGCCTGTTTTCGTTGTTCAACGATATTCGATGCGAAACATTGCCTACCAGCTGGTG
CCATATATTGTAGAGAGTGTATCTTGCTTGGGCGCGTGCGGACAGATGAGGATTTGTATTCATTTCCTCAGCAAGCATTT
CCGCGACAAAAGTCGTTAAAATGGCAAGGACAGTTGACCGTTTGGCAGCAAGAAATTTCAGATATCTTACGGCAACATTT
GAACGCTAGAACAGCTACCTTGGTTCATGCGGTAACAGGAGCTGGAAAGACCGAGATGATATATCAAGTGGTTGCAGATG
TGATTGATGCAGGAGGAGCCGTGTGCTTAGCTAGTCCGCGGATTGATGTCTGTATCGAATTGTATAGGCGATTACAAGAG
GATTTTGCTTGTCCAATCAGCCTCTTACATGGTGCAGGAGAAGCCTATTTTCGCACACCTTTGGTCATTGCGACTACGCA
TCAATTACTCAAATTCTATCGCGCTTTTGACTTGGTTCTGATTGACGAAGTCGATGCTTTTCCCTATACGGATAATCCAG
TGCTCTACCGTGCAGTAGAAAATGCTGTCAAAGAAGACGGAGTGACCATGTTTTTGACAGCGACATCAACAGATAAATTG
GAACAAAAGGTCCGTGCAGGGAGCTTACACCGGCTCCGTTTGCCACGACGTTTTCATGGAAATCCACTAGTTGTTCCCCA
AAAAGTATGGCTGGCTCACTTTGAAAATTCTCTAAAAAAGAACAAGATTGTCCCCAAATTACTCAAAAAGATAGCTAATC
AACAGCAAACAGGCTTTCCGTTACTGCTTTTCCTACCAGAAATTCAGATGGGACACCATTTTGCACAGTTGTTAGAGGGC
AACTTTCCAGATGAAAGCATTGGCTTTGTATCTAGTCAAACAGAAAATCGCTTTGAAATCGTTGAACAATTTCGCAAGAA
AGAAATCAGTATTCTTATTACAACAACGATTTTGGAACGTGGAATAACCTTTCCTTGTATAGATGTGTTTGTTGTAAATG
CCAATCATCATCTCTATACTTCCTCGTCATTGATTCAGATTGCTGGGCGAGTTGGTCGAAGCATGGAACGTCCGACAGGT
GAAGTGCTCTTCTTTCAAGATGGAACTAATCATGCGATTGAAAAAGCTATTCAAGAGATTCGATTGATGAACGAGGAGGC
AGGCTATGGCAACATGTCTATTATGTCAGCAAACGCTTAG

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (284-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA/cflA	Streptococcus mitis NCTC 12261	62.911	97.039	0.61
comFA/cflA	Streptococcus pneumoniae D39	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae R6	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae Rx1	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae TIGR4	62.676	97.039	0.608
comFA/cflA	Streptococcus mitis SK321	62.441	97.039	0.606
comFA	Lactococcus lactis subsp. cremoris KW2	51.19	95.672	0.49