Detailed information NTG0908025

Bioinformatically predicted

Overview

• Name: comFA/cflA
• Type: Machinery gene
• Locus tag: SOL79_RS08420
• Genome accession: NZ_CP139210
• Coordinates: 1909707..1911026 (+)
• Length: 439 a.a.
• NCBI ID: WP_135029335.1
• Uniprot ID: -
• Organism: Streptococcus sp. VEG1o
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1904707..1916026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOL79_RS08400 (SOL79_08385)	-	1905120..1905479 (+)	360	WP_135029341.1	S1 RNA-binding domain-containing protein	-
SOL79_RS08405 (SOL79_08390)	cysK	1905712..1906632 (-)	921	WP_135029339.1	cysteine synthase A	-
SOL79_RS08410 (SOL79_08395)	-	1908074..1908835 (-)	762	WP_135029338.1	trypsin-like serine protease	-
SOL79_RS08415 (SOL79_08400)	-	1909008..1909640 (-)	633	WP_135029336.1	YigZ family protein	-
SOL79_RS08420 (SOL79_08405)	comFA/cflA	1909707..1911026 (+)	1320	WP_135029335.1	DEAD/DEAH box helicase	Machinery gene
SOL79_RS08425	-	1910992..1911657 (+)	666	WP_135029334.1	ComF family protein	-
SOL79_RS08430 (SOL79_08415)	hpf	1911734..1912276 (+)	543	WP_135029331.1	ribosome hibernation-promoting factor, HPF/YfiA family	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 49714.20 Da
• Isoelectric Point: 7.2988

>NTDB_id=908025 SOL79_RS08420 WP_135029335.1 1909707..1911026(+) (comFA/cflA) [Streptococcus sp. VEG1o]
MTDLANYYGRLFTYHQLTEEERMQATKLASQTADKACFRCSTIFDAKHCLPAGAIYCRECILLGRVRTDEDLYSFPQQAF
PRQKSLKWQGQLTVWQQEISDILRQHLNARTATLVHAVTGAGKTEMIYQVVADVIDAGGAVCLASPRIDVCIELYRRLQE
DFACPISLLHGAGEAYFRTPLVIATTHQLLKFYRAFDLVLIDEVDAFPYTDNPVLYRAVENAVKEDGVTMFLTATSTDKL
EQKVRAGSLHRLRLPRRFHGNPLVVPQKVWLAHFENSLKKNKIVPKLLKKIANQQQTGFPLLLFLPEIQMGHHFAQLLEG
NFPDESIGFVSSQTENRFEIVEQFRKKEISILITTTILERGITFPCIDVFVVNANHHLYTSSSLIQIAGRVGRSMERPTG
EVLFFQDGTNHAIEKAIQEIRLMNEEAGYGNMSIMSANA

Nucleotide

• Length: 1320 bp

>NTDB_id=908025 SOL79_RS08420 WP_135029335.1 1909707..1911026(+) (comFA/cflA) [Streptococcus sp. VEG1o]
ATGACGGATCTAGCAAATTACTACGGACGATTGTTTACTTATCACCAACTAACAGAAGAAGAACGCATGCAAGCCACGAA
ACTAGCAAGTCAGACAGCTGATAAGGCCTGTTTTCGTTGTTCAACGATATTCGATGCGAAACATTGCCTACCAGCTGGTG
CCATATATTGTAGAGAGTGTATCTTGCTTGGGCGCGTGCGGACAGATGAGGATTTGTATTCATTTCCTCAGCAAGCATTT
CCGCGACAAAAGTCGTTAAAATGGCAAGGACAGTTGACCGTTTGGCAGCAAGAAATTTCAGATATCTTACGGCAACATTT
GAACGCTAGAACAGCTACCTTGGTTCATGCGGTAACAGGAGCTGGAAAGACCGAGATGATATATCAAGTGGTTGCAGATG
TGATTGATGCAGGAGGAGCCGTGTGCTTAGCTAGTCCGCGGATTGATGTCTGTATCGAATTGTATAGGCGATTACAAGAG
GATTTTGCTTGTCCAATCAGCCTCTTACATGGTGCAGGAGAAGCCTATTTTCGCACACCTTTGGTCATTGCGACTACGCA
TCAATTACTCAAATTCTATCGCGCTTTTGACTTGGTTCTGATTGACGAAGTCGATGCTTTTCCCTATACGGATAATCCAG
TGCTCTACCGTGCAGTAGAAAATGCTGTCAAAGAAGACGGAGTGACCATGTTTTTGACAGCGACATCAACAGATAAATTG
GAACAAAAGGTCCGTGCAGGGAGCTTACACCGGCTCCGTTTGCCACGACGTTTTCATGGAAATCCACTAGTTGTTCCCCA
AAAAGTATGGCTGGCTCACTTTGAAAATTCTCTAAAAAAGAACAAGATTGTCCCCAAATTACTCAAAAAGATAGCTAATC
AACAGCAAACAGGCTTTCCGTTACTGCTTTTCCTACCAGAAATTCAGATGGGACACCATTTTGCACAGTTGTTAGAGGGC
AACTTTCCAGATGAAAGCATTGGCTTTGTATCTAGTCAAACAGAAAATCGCTTTGAAATCGTTGAACAATTTCGCAAGAA
AGAAATCAGTATTCTTATTACAACAACGATTTTGGAACGTGGAATAACCTTTCCTTGTATAGATGTGTTTGTTGTAAATG
CCAATCATCATCTCTATACTTCCTCGTCATTGATTCAGATTGCTGGGCGAGTTGGTCGAAGCATGGAACGTCCGACAGGT
GAAGTGCTCTTCTTTCAAGATGGAACTAATCATGCGATTGAAAAAGCTATTCAAGAGATTCGATTGATGAACGAGGAGGC
AGGCTATGGCAACATGTCTATTATGTCAGCAAACGCTTAG

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (284-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA/cflA	Streptococcus mitis NCTC 12261	62.911	97.039	0.61
comFA/cflA	Streptococcus pneumoniae D39	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae R6	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae Rx1	62.676	97.039	0.608
comFA/cflA	Streptococcus pneumoniae TIGR4	62.676	97.039	0.608
comFA/cflA	Streptococcus mitis SK321	62.441	97.039	0.606
comFA	Lactococcus lactis subsp. cremoris KW2	51.19	95.672	0.49