Detailed information NTG0090787

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: TM2_RS16320
• Genome accession: NZ_AP025262
• Coordinates: 3150016..3151191 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain TM2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3145016..3156191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TM2_RS16290 (TM2_31720)	-	3145192..3145611 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
TM2_RS16295 (TM2_31730)	-	3145668..3146390 (-)	723	WP_419465664.1	ComF family protein	-
TM2_RS16300 (TM2_31740)	-	3146351..3146644 (-)	294	WP_099496873.1	late competence development ComFB family protein	-
TM2_RS16305 (TM2_31750)	comFA	3146709..3148088 (-)	1380	WP_419465672.1	DEAD/DEAH box helicase	Machinery gene
TM2_RS16310 (TM2_31760)	-	3148208..3149050 (-)	843	WP_024719242.1	DegV family protein	-
TM2_RS16315 (TM2_31770)	degU	3149262..3149951 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
TM2_RS16320 (TM2_31780)	degS	3150016..3151191 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
TM2_RS16325 (TM2_31790)	-	3151413..3152081 (+)	669	WP_236810098.1	YigZ family protein	-
TM2_RS16330 (TM2_31800)	-	3152066..3153163 (+)	1098	Protein_3169	LCP family protein	-
TM2_RS16335 (TM2_31810)	-	3153201..3154268 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
TM2_RS16340 (TM2_31820)	tuaH	3154403..3155650 (-)	1248	WP_236810099.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=90787 TM2_RS16320 WP_003213166.1 3150016..3151191(-) (degS) [Bacillus altitudinis strain TM2]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=90787 TM2_RS16320 WP_003213166.1 3150016..3151191(-) (degS) [Bacillus altitudinis strain TM2]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841