Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   SK061_RS15310 Genome accession   NZ_CP139190
Coordinates   2977029..2977829 (-) Length   266 a.a.
NCBI ID   WP_006637490.1    Uniprot ID   A0A7Y8V4C6
Organism   Bacillus sonorensis strain PMC204     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2972029..2982829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SK061_RS15280 (SK061_15280) - 2972525..2972848 (-) 324 WP_006637484.1 membrane lipoprotein lipid attachment site-containing protein -
  SK061_RS15285 (SK061_15285) - 2972876..2973073 (-) 198 WP_006637485.1 hypothetical protein -
  SK061_RS15290 (SK061_15290) - 2973304..2974317 (-) 1014 WP_006637486.1 S66 peptidase family protein -
  SK061_RS15295 (SK061_15295) - 2974788..2975132 (-) 345 WP_006637487.1 DUF1433 domain-containing protein -
  SK061_RS15300 (SK061_15300) - 2975183..2976622 (+) 1440 WP_006637488.1 hypothetical protein -
  SK061_RS15305 (SK061_15305) - 2976634..2976945 (+) 312 WP_006637489.1 hypothetical protein -
  SK061_RS15310 (SK061_15310) spo0A 2977029..2977829 (-) 801 WP_006637490.1 sporulation transcription factor Spo0A Regulator
  SK061_RS15315 (SK061_15315) spoIVB 2978119..2979435 (-) 1317 WP_051056677.1 SpoIVB peptidase -
  SK061_RS15320 (SK061_15320) recN 2979616..2981346 (-) 1731 WP_006637492.1 DNA repair protein RecN Machinery gene
  SK061_RS15325 (SK061_15325) ahrC 2981376..2981825 (-) 450 WP_006637493.1 transcriptional regulator AhrC/ArgR -
  SK061_RS15330 (SK061_15330) - 2981932..2982777 (-) 846 WP_006637494.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29597.14 Da        Isoelectric Point: 6.6109

>NTDB_id=907731 SK061_RS15310 WP_006637490.1 2977029..2977829(-) (spo0A) [Bacillus sonorensis strain PMC204]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVIGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQMTHRAPSAQNSILRPQPESPKKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=907731 SK061_RS15310 WP_006637490.1 2977029..2977829(-) (spo0A) [Bacillus sonorensis strain PMC204]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGTCAAAA
TGACATGGAAGTGATCGGCGTGGCTTACAATGGCCAAGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCTGACGTTCTCG
TGCTGGACATTATTATGCCCCATCTCGACGGTTTGGCCGTTTTGGAGAGACTGCGGGAATCCCAGCTCAAAAAACAGCCG
AACGTCATCATGCTGACAGCTTTCGGCCAGGAAGACGTGACGAAAAAAGCCGTGGATTTGGGCGCATCTTATTTTATTCT
AAAACCATTCGATATGGAGAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAACGGGTCACAAATGACACACCGCGCCC
CTTCAGCCCAAAACAGCATTCTGCGTCCGCAGCCTGAATCACCAAAGAAAAACCTGGACGCCAGCATCACGAGCATCATC
CACGAAATCGGAGTTCCCGCCCATATCAAAGGATATCTGTACTTGAGAGAAGCCATCTCGATGGTGTATAACGATATTGA
ACTGCTCGGCAGCATTACAAAAGTGCTGTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGAGTCGAACGGG
CGATCCGCCACGCCATCGAAGTCGCTTGGAGCAGAGGCAACATCGACTCCATCTCATCGCTGTTCGGCTACACCGTCAGC
ATGTCAAAAGCAAAGCCGACGAATTCTGAATTCATCGCGATGGTGGCTGATAAGCTGCGGCTTGAGCATAAGGCTTCATA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8V4C6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.884

100

0.932