Detailed information NTG0907667

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: SIS06_RS20120
• Genome accession: NZ_CP139188
• Coordinates: 3824625..3825770 (+)
• Length: 381 a.a.
• NCBI ID: WP_283933869.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain H17-16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3819625..3830770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SIS06_RS20095 (SIS06_20095)	albF	3819641..3820921 (+)	1281	WP_283933865.1	M16 family metallopeptidase	-
SIS06_RS20100 (SIS06_20100)	albG	3820918..3821619 (+)	702	WP_283933866.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
SIS06_RS20105 (SIS06_20105)	ywhL	3821625..3823001 (-)	1377	WP_283933867.1	YncE family protein	-
SIS06_RS20110 (SIS06_20110)	ywhK	3823040..3824395 (-)	1356	WP_283933868.1	YncE family protein	-
SIS06_RS20115 (SIS06_20115)	-	3824392..3824622 (-)	231	WP_125121078.1	hypothetical protein	-
SIS06_RS20120 (SIS06_20120)	rapF	3824625..3825770 (+)	1146	WP_283933869.1	response regulator aspartate phosphatase RapF	Regulator
SIS06_RS20125 (SIS06_20125)	phrF	3825754..3825873 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
SIS06_RS20130 (SIS06_20130)	-	3826100..3826576 (+)	477	WP_015384936.1	hypothetical protein	-
SIS06_RS20135 (SIS06_20135)	-	3826734..3827522 (+)	789	WP_029318692.1	membrane protein	-
SIS06_RS20140 (SIS06_20140)	-	3828998..3829645 (+)	648	WP_029318689.1	ABC transporter ATP-binding protein	-
SIS06_RS20145 (SIS06_20145)	-	3829638..3830201 (+)	564	WP_283933870.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45581.98 Da
• Isoelectric Point: 4.9861

>NTDB_id=907667 SIS06_RS20120 WP_283933869.1 3824625..3825770(+) (rapF) [Bacillus subtilis strain H17-16]
MTGVISSSSIGEKINEWYIYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=907667 SIS06_RS20120 WP_283933869.1 3824625..3825770(+) (rapF) [Bacillus subtilis strain H17-16]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATTTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAACTTGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57