Detailed information NTG0907642

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: SIS06_RS14000
• Genome accession: NZ_CP139188
• Coordinates: 2640469..2642799 (-)
• Length: 776 a.a.
• NCBI ID: WP_172861318.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain H17-16
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2635469..2647799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SIS06_RS13965 (SIS06_13965)	yqxA	2635808..2636146 (-)	339	WP_032726189.1	YqxA family protein	-
SIS06_RS13970 (SIS06_13970)	spoIIP	2636163..2637368 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
SIS06_RS13975 (SIS06_13975)	gpr	2637431..2638537 (-)	1107	WP_014480309.1	GPR endopeptidase	-
SIS06_RS13980 (SIS06_13980)	rpsT	2638741..2639007 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
SIS06_RS13985 (SIS06_13985)	holA	2639022..2640065 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
SIS06_RS13990 (SIS06_13990)	-	2640105..2640218 (-)	114	WP_134975484.1	hypothetical protein	-
SIS06_RS13995 (SIS06_13995)	yqzM	2640295..2640429 (+)	135	WP_003229983.1	YqzM family protein	-
SIS06_RS14000 (SIS06_14000)	comEC	2640469..2642799 (-)	2331	WP_172861318.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SIS06_RS14005 (SIS06_14005)	comEB	2642803..2643372 (-)	570	WP_003229978.1	ComE operon protein 2	-
SIS06_RS14010 (SIS06_14010)	comEA	2643439..2644056 (-)	618	WP_232567367.1	competence protein ComEA	Machinery gene
SIS06_RS14015 (SIS06_14015)	comER	2644140..2644961 (+)	822	WP_077671455.1	late competence protein ComER	-
SIS06_RS14020 (SIS06_14020)	yqeM	2645027..2645770 (-)	744	WP_072174289.1	class I SAM-dependent DNA methyltransferase	-
SIS06_RS14025 (SIS06_14025)	rsfS	2645767..2646123 (-)	357	WP_014477391.1	ribosome silencing factor	-
SIS06_RS14030 (SIS06_14030)	yqeK	2646141..2646701 (-)	561	WP_283933574.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
SIS06_RS14035 (SIS06_14035)	nadD	2646691..2647260 (-)	570	WP_283933575.1	nicotinate-nucleotide adenylyltransferase	-
SIS06_RS14040 (SIS06_14040)	yhbY	2647272..2647562 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86711.32 Da
• Isoelectric Point: 7.1434

>NTDB_id=907642 SIS06_RS14000 WP_172861318.1 2640469..2642799(-) (comEC) [Bacillus subtilis strain H17-16]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKRIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMAGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKYHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGIN
NRYHHPHHEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=907642 SIS06_RS14000 WP_172861318.1 2640469..2642799(-) (comEC) [Bacillus subtilis strain H17-16]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCGGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACGTATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCACTCATGGCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATACTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTTACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGT
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGTATCA
TAAAGTAAAGCGCCTTGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACGGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACAGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGATAAAC
AATCGGTACCACCATCCTCATCATGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGACCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978