Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | SIS06_RS06565 | Genome accession | NZ_CP139188 |
| Coordinates | 1237537..1238688 (+) | Length | 383 a.a. |
| NCBI ID | WP_283934239.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain H17-16 | ||
| Function | homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake |
||
Genomic Context
Location: 1232537..1243688
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SIS06_RS06530 (SIS06_06530) | yjbB | 1233206..1234423 (+) | 1218 | WP_283934460.1 | MFS transporter | - |
| SIS06_RS06535 (SIS06_06535) | yjbC | 1234587..1235165 (+) | 579 | WP_003224597.1 | GNAT family N-acetyltransferase | - |
| SIS06_RS06540 (SIS06_06540) | spx | 1235346..1235741 (+) | 396 | WP_014476435.1 | transcriptional regulator Spx | - |
| SIS06_RS06545 (SIS06_06545) | yjbE | 1235787..1236443 (-) | 657 | WP_003232944.1 | TerC family protein | - |
| SIS06_RS06550 (SIS06_06550) | - | 1236613..1236753 (+) | 141 | WP_119122854.1 | hypothetical protein | - |
| SIS06_RS06555 (SIS06_06555) | mecA | 1236720..1237376 (+) | 657 | WP_003232942.1 | adaptor protein MecA | Regulator |
| SIS06_RS06560 (SIS06_06560) | - | 1237371..1237493 (-) | 123 | WP_161621487.1 | hypothetical protein | - |
| SIS06_RS06565 (SIS06_06565) | coiA | 1237537..1238688 (+) | 1152 | WP_283934239.1 | competence protein CoiA | Machinery gene |
| SIS06_RS06570 (SIS06_06570) | pepF | 1238918..1240747 (+) | 1830 | WP_003245178.1 | oligoendopeptidase F | - |
| SIS06_RS06575 (SIS06_06575) | - | 1240785..1240952 (-) | 168 | WP_003244944.1 | hypothetical protein | - |
| SIS06_RS06580 (SIS06_06580) | spxH | 1241267..1242166 (-) | 900 | WP_003245184.1 | protease adaptor protein SpxH | - |
| SIS06_RS06585 (SIS06_06585) | bhbI | 1242163..1242561 (-) | 399 | WP_003232928.1 | group 2 truncated hemoglobin YjbI | - |
| SIS06_RS06590 (SIS06_06590) | cwlQ | 1242816..1243550 (-) | 735 | WP_283934240.1 | bifunctional muramidase/murein lytic transglycosylase | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 44875.95 Da Isoelectric Point: 9.9417
>NTDB_id=907618 SIS06_RS06565 WP_283934239.1 1237537..1238688(+) (coiA) [Bacillus subtilis strain H17-16]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
Nucleotide
Download Length: 1152 bp
>NTDB_id=907618 SIS06_RS06565 WP_283934239.1 1237537..1238688(+) (coiA) [Bacillus subtilis strain H17-16]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCATTTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCATTTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Bacillus subtilis subsp. subtilis str. 168 |
98.391 |
97.389 |
0.958 |