Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SIS06_RS06555 Genome accession   NZ_CP139188
Coordinates   1236720..1237376 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain H17-16     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1231720..1242376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIS06_RS06525 (SIS06_06525) oppF 1232182..1233099 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  SIS06_RS06530 (SIS06_06530) yjbB 1233206..1234423 (+) 1218 WP_283934460.1 MFS transporter -
  SIS06_RS06535 (SIS06_06535) yjbC 1234587..1235165 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  SIS06_RS06540 (SIS06_06540) spx 1235346..1235741 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  SIS06_RS06545 (SIS06_06545) yjbE 1235787..1236443 (-) 657 WP_003232944.1 TerC family protein -
  SIS06_RS06550 (SIS06_06550) - 1236613..1236753 (+) 141 WP_119122854.1 hypothetical protein -
  SIS06_RS06555 (SIS06_06555) mecA 1236720..1237376 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  SIS06_RS06560 (SIS06_06560) - 1237371..1237493 (-) 123 WP_161621487.1 hypothetical protein -
  SIS06_RS06565 (SIS06_06565) coiA 1237537..1238688 (+) 1152 WP_283934239.1 competence protein CoiA Machinery gene
  SIS06_RS06570 (SIS06_06570) pepF 1238918..1240747 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  SIS06_RS06575 (SIS06_06575) - 1240785..1240952 (-) 168 WP_003244944.1 hypothetical protein -
  SIS06_RS06580 (SIS06_06580) spxH 1241267..1242166 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=907617 SIS06_RS06555 WP_003232942.1 1236720..1237376(+) (mecA) [Bacillus subtilis strain H17-16]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=907617 SIS06_RS06555 WP_003232942.1 1236720..1237376(+) (mecA) [Bacillus subtilis strain H17-16]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991