Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SIS06_RS06445 Genome accession   NZ_CP139188
Coordinates   1215251..1215442 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain H17-16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1210251..1220442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIS06_RS06415 (SIS06_06415) argF 1211115..1212074 (+) 960 WP_038828321.1 ornithine carbamoyltransferase -
  SIS06_RS06420 (SIS06_06420) yjzC 1212160..1212339 (+) 180 WP_003245356.1 YjzC family protein -
  SIS06_RS06425 (SIS06_06425) yjzD 1212386..1212571 (-) 186 WP_003245236.1 YjzD family protein -
  SIS06_RS06430 (SIS06_06430) - 1212820..1213554 (+) 735 WP_003245223.1 hypothetical protein -
  SIS06_RS06435 (SIS06_06435) - 1213636..1214193 (+) 558 WP_128747034.1 hypothetical protein -
  SIS06_RS06440 (SIS06_06440) med 1214283..1215236 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  SIS06_RS06445 (SIS06_06445) comZ 1215251..1215442 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  SIS06_RS06450 (SIS06_06450) yjzB 1215472..1215708 (-) 237 WP_072173825.1 spore coat protein YjzB -
  SIS06_RS06455 (SIS06_06455) fabH 1215873..1216811 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  SIS06_RS06460 (SIS06_06460) fabF 1216834..1218075 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  SIS06_RS06465 (SIS06_06465) yjaZ 1218151..1218936 (+) 786 WP_032725393.1 DUF2268 domain-containing protein -
  SIS06_RS06470 (SIS06_06470) appD 1219127..1220113 (+) 987 WP_283934237.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=907614 SIS06_RS06445 WP_003224559.1 1215251..1215442(+) (comZ) [Bacillus subtilis strain H17-16]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=907614 SIS06_RS06445 WP_003224559.1 1215251..1215442(+) (comZ) [Bacillus subtilis strain H17-16]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1