Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SIS06_RS02170 Genome accession   NZ_CP139188
Coordinates   428238..429188 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain H17-16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 423238..434188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIS06_RS02145 (SIS06_02145) rapC 424698..425846 (+) 1149 WP_283934054.1 response regulator aspartate phosphatase RapC Regulator
  SIS06_RS02150 (SIS06_02150) phrC 425830..425952 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  SIS06_RS02155 (SIS06_02155) yczM 426052..426141 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  SIS06_RS02160 (SIS06_02160) yczN 426223..426336 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  SIS06_RS02165 (SIS06_02165) thrD 426489..427853 (-) 1365 WP_015715246.1 aspartate kinase -
  SIS06_RS02170 (SIS06_02170) ceuB 428238..429188 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  SIS06_RS02175 (SIS06_02175) yclO 429181..430128 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  SIS06_RS02180 (SIS06_02180) yclP 430122..430880 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  SIS06_RS02185 (SIS06_02185) yclQ 430902..431855 (+) 954 WP_283934055.1 petrobactin ABC transporter substrate-binding protein YclQ -
  SIS06_RS02190 (SIS06_02190) cdaE 431902..433320 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=907603 SIS06_RS02170 WP_014475804.1 428238..429188(+) (ceuB) [Bacillus subtilis strain H17-16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=907603 SIS06_RS02170 WP_014475804.1 428238..429188(+) (ceuB) [Bacillus subtilis strain H17-16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTACTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525