Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SKB18_RS06555 Genome accession   NZ_CP139163
Coordinates   1333634..1334893 (+) Length   419 a.a.
NCBI ID   WP_012027845.1    Uniprot ID   A0A0Z8VH60
Organism   Streptococcus suis strain cnzyss2-311     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1328634..1339893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SKB18_RS06535 - 1330214..1331506 (+) 1293 WP_012775353.1 adenylosuccinate synthase -
  SKB18_RS06540 yajC 1331616..1331939 (+) 324 WP_012028522.1 preprotein translocase subunit YajC -
  SKB18_RS06545 - 1332053..1332808 (+) 756 WP_012775352.1 isoprenyl transferase -
  SKB18_RS06550 - 1332818..1333624 (+) 807 WP_012027846.1 phosphatidate cytidylyltransferase -
  SKB18_RS06555 eeP 1333634..1334893 (+) 1260 WP_012027845.1 RIP metalloprotease Regulator
  SKB18_RS06560 - 1335174..1337036 (+) 1863 WP_274753187.1 proline--tRNA ligase -
  SKB18_RS06565 - 1337218..1337928 (-) 711 WP_012027843.1 MIP/aquaporin family protein -
  SKB18_RS06570 dhaM 1337938..1338312 (-) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  SKB18_RS06575 dhaL 1338309..1338884 (-) 576 WP_012027842.1 dihydroxyacetone kinase subunit DhaL -
  SKB18_RS06580 dhaK 1338895..1339884 (-) 990 WP_012027841.1 dihydroxyacetone kinase subunit DhaK -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=907464 SKB18_RS06555 WP_012027845.1 1333634..1334893(+) (eeP) [Streptococcus suis strain cnzyss2-311]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=907464 SKB18_RS06555 WP_012027845.1 1333634..1334893(+) (eeP) [Streptococcus suis strain cnzyss2-311]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGAGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8VH60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652