Detailed information NTG0906833

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABNW24_RS20850
• Genome accession: NZ_CP157958
• Coordinates: 4242111..4243136 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 800
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4237111..4248136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNW24_RS20820 (ABNW24_20820)	zapB	4237195..4237440 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABNW24_RS20825 (ABNW24_20825)	rraA	4237525..4238010 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABNW24_RS20830 (ABNW24_20830)	menA	4238103..4239029 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABNW24_RS20835 (ABNW24_20835)	hslU	4239096..4240427 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABNW24_RS20840 (ABNW24_20840)	hslV	4240437..4240967 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABNW24_RS20845 (ABNW24_20845)	ftsN	4241060..4242019 (-)	960	WP_000068828.1	cell division protein FtsN	-
ABNW24_RS20850 (ABNW24_20850)	cytR	4242111..4243136 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABNW24_RS20855 (ABNW24_20855)	priA	4243292..4245490 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABNW24_RS20860 (ABNW24_20860)	rpmE	4245693..4245905 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABNW24_RS20865 (ABNW24_20865)	yiiX	4245966..4246574 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABNW24_RS20870 (ABNW24_20870)	metJ	4246758..4247075 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=906833 ABNW24_RS20850 WP_000644904.1 4242111..4243136(-) (cytR) [Escherichia coli strain 800]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=906833 ABNW24_RS20850 WP_000644904.1 4242111..4243136(-) (cytR) [Escherichia coli strain 800]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628