Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   ABLB99_RS07540 Genome accession   NZ_CP157447
Coordinates   1597126..1598619 (-) Length   497 a.a.
NCBI ID   WP_004708399.1    Uniprot ID   A0AA36NYD0
Organism   Acinetobacter nosocomialis strain XH1727     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1592126..1603619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB99_RS07515 (ABLB99_07510) - 1593218..1593862 (-) 645 WP_215896345.1 hypothetical protein -
  ABLB99_RS07520 (ABLB99_07515) ispF 1593966..1594448 (+) 483 WP_002049661.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  ABLB99_RS07525 (ABLB99_07520) - 1594445..1594969 (-) 525 WP_139887616.1 protein tyrosine phosphatase family protein -
  ABLB99_RS07530 (ABLB99_07525) argF 1595156..1596082 (-) 927 WP_139887614.1 ornithine carbamoyltransferase -
  ABLB99_RS07535 (ABLB99_07530) adeN 1596196..1596849 (-) 654 WP_022575603.1 multidrug efflux transcriptional repressor AdeN -
  ABLB99_RS07540 (ABLB99_07535) luxO 1597126..1598619 (-) 1494 WP_004708399.1 nitrogen regulation protein NR(I) Regulator
  ABLB99_RS07545 (ABLB99_07540) glnL 1598606..1599715 (-) 1110 WP_002049598.1 nitrogen regulation protein NR(II) -
  ABLB99_RS07550 (ABLB99_07545) rimO 1600057..1601400 (+) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  ABLB99_RS07555 (ABLB99_07550) pyrH 1601452..1602180 (+) 729 WP_000852257.1 UMP kinase -
  ABLB99_RS07560 (ABLB99_07555) frr 1602266..1602820 (+) 555 WP_002049637.1 ribosome recycling factor -
  ABLB99_RS07565 (ABLB99_07560) uppS 1602825..1603577 (+) 753 WP_004708401.1 polyprenyl diphosphate synthase -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56250.08 Da        Isoelectric Point: 6.3154

>NTDB_id=905522 ABLB99_RS07540 WP_004708399.1 1597126..1598619(-) (luxO) [Acinetobacter nosocomialis strain XH1727]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKNSEASQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKVTLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=905522 ABLB99_RS07540 WP_004708399.1 1597126..1598619(-) (luxO) [Acinetobacter nosocomialis strain XH1727]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTCGAACGTTTACATCATGATGCGCCGGATGTCATCTTAACTG
ACATCCGTATGCCAGGCATTGATGGATTAACTTTCTTATCTAAAGTAAAAAACTCTCATCCTGATTTGCCTGTGATTATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCTAGCTATCAAACTGGTGCATTTGAGTATTTACCAAAACCGTTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTACATATCAATAAATTGCAGCAACAAGAGGCTACAAAAACTG
CTTCTCCACTACAATCGACAGAAATTATTGGTGAATCTCCGGCTATGCAAGAGGTTTTCCGAGCAATTGGTCGCCTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAGTCAGGAACAGGTAAAGAATTAGTTGCACATGCTTTACATAAGCATTC
ACCACGCAGAGCCAAACCATTTATTGCTCTAAACATGGCAGCAATTCCGAAAGACTTAATCGAAACAGAATTATTTGGCC
ATGAAAAAGGTGCTTTTACTGGCGCTAATACCCAACATCAAGGTCGCTTTGAACAAGCCAATGGTGGCACTCTCTTCCTT
GATGAAATTGGTGACATGCCATTTGAAACACAGACGCGATTACTACGTGTACTCGCAGATGGTGAGTTTTACCGCGTTGG
CGGGCATATCCCTGTTAAAGTTGATGTTCGGATCGTAGCGGCAACACACCAAGATTTAGAAAAATTGGTAAATGAAGGTC
GCTTCCGTGAAGACTTATACCACCGTTTAAATGTAATTCGTATTCATATTCCTAAGCTTGCACATCGAAGTGAAGATATT
CCGATGTTAGCTCAACATTTCTTGGCTCGTGCTGGTAAAGAGTTAGGCGTAAGTCCAAAGATTTTACGTACCGAGACAAC
TGACTATATGCAGCAATTACCATGGCCCGGTAATGTTCGTCAGCTTGAAAATACCTGCCGCTGGTTAACCGTCATGATTA
CTGGCCGTGAGGTTTACCCAGAAGATTTACCTTCAGAACTTAAACAAGTTCCACTTCAAAAAAATAGTGAAGCTAGCCAA
CCTGCTCCATCTTTTGAGCGTATTTCTTTACATCATTGGGATGAGCTACTAAGTCAATGGGCAATTCAAAAACTCAAAAA
TGGCGAAATGAAGATTTTGGATATTGCTACACCAATGTTTGAGCGCACTTTAATTAATGCTGCACTACAGCAAACTCGTG
GACGCAAACGTCATGCAGCCGAGCTATTAGGTTGGGGTCGCAACACTCTAACCCGAAAGTTAAAAGAACTAGGCATGGAT
TCTGCTGATGACGATGATGAGGATGAACACAAAGTAACTTTGTCTGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NYD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.402

90.141

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362