Detailed information NTG0905170

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: ABDM36_RS00765
• Genome accession: NZ_CP157384
• Coordinates: 158529..159929 (-)
• Length: 466 a.a.
• NCBI ID: WP_000086389.1
• Uniprot ID: -
• Organism: Vibrio cholerae C6706
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 153529..164929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDM36_RS00755	add	154843..155847 (-)	1005	WP_000633281.1	adenosine deaminase	-
ABDM36_RS00760	-	155939..158470 (-)	2532	WP_001128660.1	EAL domain-containing protein	-
ABDM36_RS00765	luxO	158529..159929 (-)	1401	WP_000086389.1	nitrogen regulation protein NR(I)	Regulator
ABDM36_RS00770	glnL	159939..160997 (-)	1059	WP_001918943.1	nitrogen regulation protein NR(II)	-
ABDM36_RS00775	-	161136..161726 (-)	591	WP_000099256.1	DUF4124 domain-containing protein	-
ABDM36_RS00780	glnA	161904..163313 (-)	1410	WP_000110151.1	glutamate--ammonia ligase	-
ABDM36_RS00785	-	163458..163781 (+)	324	WP_000244705.1	hypothetical protein	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52319.80 Da
• Isoelectric Point: 6.6387

>NTDB_id=905170 ABDM36_RS00765 WP_000086389.1 158529..159929(-) (luxO) [Vibrio cholerae C6706]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=905170 ABDM36_RS00765 WP_000086389.1 158529..159929(-) (luxO) [Vibrio cholerae C6706]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTACACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACATAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAATATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCAAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373