Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SGW63_RS12235 Genome accession   NZ_CP138670
Coordinates   2449778..2450821 (+) Length   347 a.a.
NCBI ID   WP_001017133.1    Uniprot ID   -
Organism   Staphylococcus aureus strain DA70500     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2444778..2455821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW63_RS12205 - 2445145..2445255 (+) 111 WP_001790257.1 hypothetical protein -
  SGW63_RS12210 - 2445284..2445697 (+) 414 WP_001549145.1 hypothetical protein -
  SGW63_RS12215 - 2446187..2447173 (-) 987 WP_031811349.1 aromatic acid exporter family protein -
  SGW63_RS12220 map 2447704..2448462 (+) 759 WP_000636144.1 type I methionyl aminopeptidase -
  SGW63_RS12225 - 2448679..2449065 (+) 387 WP_001110179.1 hypothetical protein -
  SGW63_RS12230 liaF 2449080..2449781 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  SGW63_RS12235 vraS 2449778..2450821 (+) 1044 WP_001017133.1 sensor histidine kinase Regulator
  SGW63_RS12240 vraR 2450811..2451440 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  SGW63_RS12245 - 2451552..2452769 (-) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  SGW63_RS12250 - 2453047..2453322 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  SGW63_RS12255 - 2453329..2453793 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  SGW63_RS12260 - 2453940..2454140 (+) 201 WP_000180463.1 DUF1128 family protein -
  SGW63_RS12265 - 2454143..2455399 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40043.54 Da        Isoelectric Point: 6.2447

>NTDB_id=904475 SGW63_RS12235 WP_001017133.1 2449778..2450821(+) (vraS) [Staphylococcus aureus strain DA70500]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLNQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=904475 SGW63_RS12235 WP_001017133.1 2449778..2450821(+) (vraS) [Staphylococcus aureus strain DA70500]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAAACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997