Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SGW66_RS02360 Genome accession   NZ_CP138669
Coordinates   421807..422493 (+) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain DA70710     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 416807..427493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW66_RS02325 yqeH 417334..418434 (+) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -
  SGW66_RS02330 aroE 418448..419254 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  SGW66_RS02335 yhbY 419258..419548 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  SGW66_RS02340 nadD 419551..420120 (+) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SGW66_RS02345 yqeK 420110..420694 (+) 585 WP_001017837.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  SGW66_RS02350 rsfS 420695..421048 (+) 354 WP_001088020.1 ribosome silencing factor -
  SGW66_RS02355 - 421051..421767 (+) 717 WP_000084840.1 class I SAM-dependent methyltransferase -
  SGW66_RS02360 comEA 421807..422493 (+) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  SGW66_RS02365 - 422585..423046 (+) 462 WP_000439693.1 ComE operon protein 2 -
  SGW66_RS02370 comEC 423051..425252 (+) 2202 WP_001622275.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SGW66_RS02375 holA 425309..426283 (+) 975 WP_001282573.1 DNA polymerase III subunit delta -
  SGW66_RS02380 rpsT 426328..426579 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=904413 SGW66_RS02360 WP_072468915.1 421807..422493(+) (comEA) [Staphylococcus aureus strain DA70710]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=904413 SGW66_RS02360 WP_072468915.1 421807..422493(+) (comEA) [Staphylococcus aureus strain DA70710]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACACCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961