Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SGW60_RS02130 Genome accession   NZ_CP138667
Coordinates   393288..393974 (+) Length   228 a.a.
NCBI ID   WP_001793467.1    Uniprot ID   A0A641AAY3
Organism   Staphylococcus aureus strain DA70900     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 388288..398974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW60_RS02095 yqeH 388815..389915 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  SGW60_RS02100 aroE 389929..390735 (+) 807 WP_000666748.1 shikimate dehydrogenase -
  SGW60_RS02105 yhbY 390739..391029 (+) 291 WP_338433486.1 ribosome assembly RNA-binding protein YhbY -
  SGW60_RS02110 nadD 391032..391601 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SGW60_RS02115 yqeK 391591..392175 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  SGW60_RS02120 rsfS 392176..392529 (+) 354 WP_001088022.1 ribosome silencing factor -
  SGW60_RS02125 - 392532..393248 (+) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  SGW60_RS02130 comEA 393288..393974 (+) 687 WP_001793467.1 ComEA family DNA-binding protein Machinery gene
  SGW60_RS02135 - 394066..394527 (+) 462 WP_000439693.1 ComE operon protein 2 -
  SGW60_RS02140 comEC 394532..396733 (+) 2202 WP_001566670.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SGW60_RS02145 holA 396790..397764 (+) 975 WP_001282568.1 DNA polymerase III subunit delta -
  SGW60_RS02150 rpsT 397809..398060 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25786.50 Da        Isoelectric Point: 9.6753

>NTDB_id=904370 SGW60_RS02130 WP_001793467.1 393288..393974(+) (comEA) [Staphylococcus aureus strain DA70900]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=904370 SGW60_RS02130 WP_001793467.1 393288..393974(+) (comEA) [Staphylococcus aureus strain DA70900]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATAATG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641AAY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

100

100

1
  comEA Staphylococcus aureus N315

97.368

100

0.974