Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SGW58_RS02200 Genome accession   NZ_CP138666
Coordinates   412006..412692 (+) Length   228 a.a.
NCBI ID   WP_001794049.1    Uniprot ID   A0A0E1X4U4
Organism   Staphylococcus aureus strain DA70300     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 407006..417692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW58_RS02165 yqeH 407533..408633 (+) 1101 WP_001280134.1 ribosome biogenesis GTPase YqeH -
  SGW58_RS02170 aroE 408647..409453 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  SGW58_RS02175 yhbY 409457..409747 (+) 291 WP_000955232.1 ribosome assembly RNA-binding protein YhbY -
  SGW58_RS02180 nadD 409750..410319 (+) 570 WP_000822938.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SGW58_RS02185 yqeK 410309..410893 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  SGW58_RS02190 rsfS 410894..411247 (+) 354 WP_001088020.1 ribosome silencing factor -
  SGW58_RS02195 - 411250..411966 (+) 717 WP_000084835.1 class I SAM-dependent methyltransferase -
  SGW58_RS02200 comEA 412006..412692 (+) 687 WP_001794049.1 ComEA family DNA-binding protein Machinery gene
  SGW58_RS02205 - 412784..413245 (+) 462 WP_000439692.1 ComE operon protein 2 -
  SGW58_RS02210 comEC 413250..415451 (+) 2202 WP_000967506.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SGW58_RS02215 holA 415508..416482 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  SGW58_RS02220 rpsT 416527..416778 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25766.38 Da        Isoelectric Point: 9.3383

>NTDB_id=904329 SGW58_RS02200 WP_001794049.1 412006..412692(+) (comEA) [Staphylococcus aureus strain DA70300]
MVLLYQFLLRYKDFLAQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTVLKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLNSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=904329 SGW58_RS02200 WP_001794049.1 412006..412692(+) (comEA) [Staphylococcus aureus strain DA70300]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAGCTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
TTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAATTCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1X4U4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

95.595

99.561

0.952
  comEA Staphylococcus aureus N315

95.595

99.561

0.952