Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SGW61_RS07655 Genome accession   NZ_CP138664
Coordinates   1600461..1601147 (-) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain DA70504     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1595461..1606147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW61_RS07635 rpsT 1596366..1596617 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  SGW61_RS07640 holA 1596662..1597636 (-) 975 WP_001282573.1 DNA polymerase III subunit delta -
  SGW61_RS07645 comEC 1597693..1599903 (-) 2211 WP_182063822.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SGW61_RS07650 - 1599908..1600369 (-) 462 WP_000439693.1 ComE operon protein 2 -
  SGW61_RS07655 comEA 1600461..1601147 (-) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  SGW61_RS07660 - 1601187..1601903 (-) 717 WP_000084840.1 class I SAM-dependent methyltransferase -
  SGW61_RS07665 rsfS 1601906..1602259 (-) 354 WP_001088020.1 ribosome silencing factor -
  SGW61_RS07670 yqeK 1602260..1602844 (-) 585 WP_001017837.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  SGW61_RS07675 nadD 1602834..1603403 (-) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SGW61_RS07680 yhbY 1603406..1603696 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  SGW61_RS07685 aroE 1603700..1604506 (-) 807 WP_042744294.1 shikimate dehydrogenase -
  SGW61_RS07690 yqeH 1604520..1605620 (-) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=904303 SGW61_RS07655 WP_072468915.1 1600461..1601147(-) (comEA) [Staphylococcus aureus strain DA70504]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=904303 SGW61_RS07655 WP_072468915.1 1600461..1601147(-) (comEA) [Staphylococcus aureus strain DA70504]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACACCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961