Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   SGW56_RS00515 Genome accession   NZ_CP138663
Coordinates   92443..93072 (+) Length   209 a.a.
NCBI ID   WP_000153535.1    Uniprot ID   W8TS97
Organism   Staphylococcus aureus strain DA70518     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 87443..98072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGW56_RS00490 - 87707..88693 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  SGW56_RS00495 map 89336..90094 (+) 759 WP_000636137.1 type I methionyl aminopeptidase -
  SGW56_RS00500 - 90311..90697 (+) 387 WP_001110184.1 hypothetical protein -
  SGW56_RS00505 liaF 90712..91413 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  SGW56_RS00510 vraS 91410..92453 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SGW56_RS00515 vraR 92443..93072 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  SGW56_RS00520 - 93185..94402 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  SGW56_RS00525 - 94680..94955 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  SGW56_RS00530 - 94962..95426 (-) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  SGW56_RS00535 - 95573..95773 (+) 201 WP_000180459.1 DUF1128 family protein -
  SGW56_RS00540 - 95785..97032 (+) 1248 WP_000656302.1 aminopeptidase -
  SGW56_RS00545 - 97122..97652 (+) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23559.32 Da        Isoelectric Point: 5.3935

>NTDB_id=904237 SGW56_RS00515 WP_000153535.1 92443..93072(+) (vraR) [Staphylococcus aureus strain DA70518]
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVL
MLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=904237 SGW56_RS00515 WP_000153535.1 92443..93072(+) (vraR) [Staphylococcus aureus strain DA70518]
ATGACGATTAAAGTATTGTTTGTGGATGATCATGAAATGGTACGTATAGGAATTTCAAGTTATCTATCAACGCAAAGTGA
TATTGAAGTAGTTGGTGAAGGCGCTTCTGGTAAAGAAGCAATTGCCAAAGCACATGAGTTGAAGCCAGATTTAATTTTAA
TGGATTTACTTATGGAAGACATGGATGGTGTAGAAGCGACGACTCAGATTAAAAAAGATTTACCGCAAATTAAAGTATTA
ATGTTAACTAGTTTTATTGAAGATAAAGAGGTATATCGTGCATTAGATGCAGGTGTCGATAGTTACATTTTAAAAACAAC
AAGTGCAAAAGATATCGCCGATGCAGTTCGTAAAACTTCTAGAGGAGAATCTGTTTTTGAACCGGAAGTTTTAGTGAAAA
TGCGTAACCGTATGAAAAAGCGTGCAGAGTTATATGAAATGCTTACAGAACGAGAAATGGAAATATTATTATTGATTGCG
AAAGGTTACTCAAATCAAGAAATTGCTAGTGCATCGCATATTACTATTAAAACGGTTAAGACACATGTGAGTAACATTTT
AAGTAAGTTAGAAGTGCAAGATAGAACACAAGCTGTTATCTATGCATTCCAACATAATTTAATTCAATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB W8TS97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

100

100

1
  degU Bacillus subtilis subsp. subtilis str. 168

34.821

100

0.373