Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   SGN29_RS05715 Genome accession   NZ_CP138576
Coordinates   1187953..1188825 (+) Length   290 a.a.
NCBI ID   WP_045177422.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MFDS1022333     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1182953..1193825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGN29_RS05695 sucC 1183067..1184233 (+) 1167 WP_001020799.1 ADP-forming succinate--CoA ligase subunit beta -
  SGN29_RS05700 sucD 1184255..1185163 (+) 909 WP_000110251.1 succinate--CoA ligase subunit alpha -
  SGN29_RS05705 - 1185390..1186508 (+) 1119 WP_001041673.1 LysM peptidoglycan-binding domain-containing protein -
  SGN29_RS05710 fmhC 1186536..1187780 (+) 1245 WP_000672869.1 FemA/FemB family glycyltransferase FmhC -
  SGN29_RS05715 dprA 1187953..1188825 (+) 873 WP_045177422.1 DNA-processing protein DprA Machinery gene
  SGN29_RS05720 topA 1188999..1191074 (+) 2076 WP_407290444.1 type I DNA topoisomerase -
  SGN29_RS05725 trmFO 1191230..1192537 (+) 1308 WP_000195259.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33554.95 Da        Isoelectric Point: 9.5094

>NTDB_id=903584 SGN29_RS05715 WP_045177422.1 1187953..1188825(+) (dprA) [Staphylococcus aureus strain MFDS1022333]
MIKLFLLKLYWAHFSTKQIHQFLMAYSNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDSEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=903584 SGN29_RS05715 WP_045177422.1 1187953..1188825(+) (dprA) [Staphylococcus aureus strain MFDS1022333]
TTGATTAAACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATTC
TAATGTAATTAAAGAGGAGGGAAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATTCTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATCGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.655

100

0.997
  dprA Staphylococcus aureus N315

99.31

100

0.993