Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   ABI116_RS20040 Genome accession   NZ_CP157214
Coordinates   3809113..3809487 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS21     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3804113..3814487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABI116_RS20015 (ABI116_20015) - 3804277..3804438 (-) 162 WP_003227632.1 hypothetical protein -
  ABI116_RS20020 (ABI116_20020) glpX 3804653..3805618 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  ABI116_RS20025 (ABI116_20025) murAB 3805649..3806938 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ABI116_RS20030 (ABI116_20030) fsa 3807317..3807955 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  ABI116_RS20035 (ABI116_20035) fbaA 3808075..3808932 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  ABI116_RS20040 (ABI116_20040) letA 3809113..3809487 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  ABI116_RS20045 (ABI116_20045) ywjG 3809653..3810174 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  ABI116_RS20050 (ABI116_20050) pyrG 3810256..3811863 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  ABI116_RS20055 (ABI116_20055) rpoE 3812105..3812626 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  ABI116_RS20060 (ABI116_20060) acdA 3812809..3813948 (-) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=903088 ABI116_RS20040 WP_003227621.1 3809113..3809487(-) (letA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=903088 ABI116_RS20040 WP_003227621.1 3809113..3809487(-) (letA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363