Detailed information NTG0902943

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: SGJ46_RS13470
• Genome accession: NZ_CP138461
• Coordinates: 2793413..2794768 (+)
• Length: 451 a.a.
• NCBI ID: WP_171525655.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain CZH-5
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2788413..2799768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGJ46_RS13450	thrC	2788584..2789729 (+)	1146	WP_005181581.1	threonine synthase	-
SGJ46_RS13455	-	2789823..2790905 (-)	1083	WP_127799456.1	serine hydrolase	-
SGJ46_RS13460	-	2791123..2791758 (+)	636	WP_005181577.1	response regulator	-
SGJ46_RS13465	pilS	2791773..2793341 (+)	1569	WP_303113925.1	sensor histidine kinase	Regulator
SGJ46_RS13470	pilR	2793413..2794768 (+)	1356	WP_171525655.1	sigma-54-dependent transcriptional regulator	Regulator
SGJ46_RS13475	-	2794785..2795954 (-)	1170	WP_329415384.1	S41 family peptidase	-
SGJ46_RS13480	gpmI	2795978..2797525 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
SGJ46_RS13485	lptG	2797644..2798714 (-)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50611.31 Da
• Isoelectric Point: 6.6716

>NTDB_id=902943 SGJ46_RS13470 WP_171525655.1 2793413..2794768(+) (pilR) [Acinetobacter indicus strain CZH-5]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAYSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAITLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=902943 SGJ46_RS13470 WP_171525655.1 2793413..2794768(+) (pilR) [Acinetobacter indicus strain CZH-5]
ATGCAAATGACATTGGCGCGCATGGGAATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCATATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGTGCCATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGCGCGGCGCAGGACAAACAGGGCCTGATCCAGTCAGCGCACG
GCGGCAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAATTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTGGAAGC
ATTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCACCTCTACGTG
AGCGTGGTCAGGATATTTTACTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATTATTGAACG
CGCCATAACCTTGAGTGATGACGATGTGATTGATCTGCCACATCTGCAAACTGCACCCTTACGCAAGATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCTGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATTGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGGCTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.279	100	0.743
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501