Detailed information NTG0090240

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CTP10_RS01530
• Genome accession: NZ_AP025170
• Coordinates: 322931..324094 (-)
• Length: 387 a.a.
• NCBI ID: WP_116317006.1
• Uniprot ID: A0A9N7Q0Y7
• Organism: Cupriavidus sp. P-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 317931..329094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTP10_RS01510 (CTP10_R03030)	-	318830..320170 (-)	1341	WP_116317003.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
CTP10_RS01515 (CTP10_R03040)	-	320592..321227 (-)	636	WP_116317807.1	ANTAR domain-containing protein	-
CTP10_RS01520 (CTP10_R03050)	-	321470..322171 (+)	702	WP_116317004.1	fumarylacetoacetate hydrolase family protein	-
CTP10_RS01525 (CTP10_R03060)	maiA	322176..322823 (+)	648	WP_116317005.1	maleylacetoacetate isomerase	-
CTP10_RS01530 (CTP10_R03070)	pilA	322931..324094 (-)	1164	WP_116317006.1	signal recognition particle-docking protein FtsY	Machinery gene
CTP10_RS01535 (CTP10_R03080)	-	324323..325861 (+)	1539	WP_116317007.1	pitrilysin family protein	-
CTP10_RS01540 (CTP10_R03090)	-	325871..327262 (+)	1392	WP_116317008.1	pitrilysin family protein	-
CTP10_RS01545 (CTP10_R03100)	rsmD	327351..328070 (+)	720	WP_199414494.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CTP10_RS01550 (CTP10_R03110)	coaD	328310..328795 (+)	486	WP_116317009.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 41104.72 Da
• Isoelectric Point: 6.8881

>NTDB_id=90240 CTP10_RS01530 WP_116317006.1 322931..324094(-) (pilA) [Cupriavidus sp. P-10]
MFSFWKKRKAEPASVETPAPAPAPLEAPAPTPTPTPAPAPVPAPAPVPTPTPVPAQVPPPAPAPVAAPEPAAAIETLELV
PAPAVTAEARQGWMHRLRTGLSKTSRNIGTLFVGVKVDEALFEELETALLMADAGVEATEYLLAELRKRVRSERIESAEG
VKAALKTLLTDLLRPLEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQRYDQKVLLAAGDTFRAAAREQLTIWGER
NNVTVVAQESGDPAAVIFDAVNAAKARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNA
LQQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFAEALLG

Nucleotide

• Length: 1164 bp

>NTDB_id=90240 CTP10_RS01530 WP_116317006.1 322931..324094(-) (pilA) [Cupriavidus sp. P-10]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCCGCGTCCGTCGAGACGCCAGCCCCGGCACCCGCGCCGCTAGAGGC
GCCCGCGCCCACCCCCACGCCCACACCCGCGCCTGCCCCGGTCCCCGCTCCGGCTCCGGTCCCGACGCCGACACCGGTTC
CCGCACAGGTGCCGCCCCCGGCGCCGGCCCCCGTGGCCGCGCCGGAACCGGCCGCCGCCATCGAAACGCTTGAACTGGTC
CCCGCGCCCGCAGTCACCGCTGAAGCCCGGCAAGGGTGGATGCATCGGCTGCGCACGGGCCTGTCCAAGACCAGCCGCAA
CATCGGCACGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAAGAGCTGGAAACCGCGCTGCTGATGGCCGACG
CGGGCGTGGAAGCCACCGAATACCTGCTGGCCGAGCTGCGCAAGCGGGTCAGGTCCGAGCGCATCGAATCGGCAGAAGGC
GTCAAGGCCGCGCTCAAGACGCTGCTGACCGACCTGCTGCGTCCGCTGGAAAAAACCATGGCGCTGGGCCGCGAGCAGCC
CCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGCGCT
ACGACCAGAAGGTCCTGCTGGCCGCTGGCGATACCTTCCGCGCCGCCGCGCGCGAGCAGCTGACGATCTGGGGCGAGCGC
AACAACGTCACCGTGGTGGCGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTGAACGCGGCCAAGGCGCG
CGGCATCGACATCGTGATGGCCGATACCGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAGGAGCTGAAGAAGGTCA
AGCGCGTCATCAGCAAGGCCATGCCGACGGCGCCGCATGAGGTGCTGCTGGTGATCGACGCCAATACCGGCCAGAATGCC
CTGCAGCAGACCCGCGCCTTCGATGATGCGCTGGGGCTGACCGGCCTGATCGTGACCAAGCTGGATGGCACCGCCAAGGG
CGGCATCCTGGCGGCGATCGCGCGCCAGCGCCCGGTGCCGGTGTACTTCATCGGCGTGGGCGAGAAGGTGGAGGACCTGC
AGCCCTTCAAGGCGGAGGAATTCGCCGAAGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (112-167)

• SRP54-type protein, GTPase domain (SRP54) (188-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.429	100	0.558