Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SE933_RS02660 Genome accession   NZ_CP138370
Coordinates   467393..468166 (-) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain SagR40     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 462393..473166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE933_RS02635 (SE933_02635) - 463056..463208 (-) 153 WP_079255570.1 helix-turn-helix domain-containing protein -
  SE933_RS02640 (SE933_02640) - 463374..463571 (-) 198 WP_000285199.1 DUF951 domain-containing protein -
  SE933_RS02645 (SE933_02645) - 463581..464474 (-) 894 WP_000987448.1 diacylglycerol kinase family protein -
  SE933_RS02650 (SE933_02650) dnaN 464532..465668 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  SE933_RS02655 (SE933_02655) dnaA 465823..467184 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  SE933_RS02660 (SE933_02660) spo0J 467393..468166 (-) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator
  SE933_RS02665 (SE933_02665) htrA 468264..469493 (-) 1230 WP_000728356.1 S1C family serine protease Regulator
  SE933_RS02670 (SE933_02670) rlmH 469694..470173 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=902393 SE933_RS02660 WP_000456088.1 467393..468166(-) (spo0J) [Streptococcus agalactiae strain SagR40]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=902393 SE933_RS02660 WP_000456088.1 467393..468166(-) (spo0J) [Streptococcus agalactiae strain SagR40]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568