Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SE116_RS13225 Genome accession   NZ_CP138362
Coordinates   2676696..2677361 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain V315     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2671696..2682361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE116_RS13205 (SE116_13205) - 2672162..2672275 (-) 114 WP_072357681.1 hypothetical protein -
  SE116_RS13210 (SE116_13210) - 2672939..2674938 (-) 2000 Protein_2564 FtsX-like permease family protein -
  SE116_RS13215 (SE116_13215) - 2674935..2675690 (-) 756 WP_000923767.1 ABC transporter ATP-binding protein -
  SE116_RS13220 (SE116_13220) braS 2675798..2676685 (-) 888 WP_319162134.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SE116_RS13225 (SE116_13225) braR 2676696..2677361 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SE116_RS13230 (SE116_13230) - 2677387..2677587 (-) 201 WP_000604725.1 hypothetical protein -
  SE116_RS13235 (SE116_13235) - 2677785..2679209 (+) 1425 WP_000948997.1 alkaline phosphatase -
  SE116_RS13770 - 2679269..2679370 (-) 102 WP_000731972.1 SE2200 family small protein -
  SE116_RS13245 (SE116_13245) - 2679492..2679947 (-) 456 WP_319162136.1 MarR family winged helix-turn-helix transcriptional regulator -
  SE116_RS13250 (SE116_13250) - 2680192..2680953 (-) 762 WP_000323449.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=902181 SE116_RS13225 WP_000697877.1 2676696..2677361(-) (braR) [Staphylococcus aureus strain V315]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=902181 SE116_RS13225 WP_000697877.1 2676696..2677361(-) (braR) [Staphylococcus aureus strain V315]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAATACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1