Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   SE116_RS13220 Genome accession   NZ_CP138362
Coordinates   2675798..2676685 (-) Length   295 a.a.
NCBI ID   WP_319162134.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V315     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2670798..2681685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE116_RS13190 (SE116_13190) - 2670813..2670905 (+) 93 WP_010956583.1 hypothetical protein -
  SE116_RS13195 (SE116_13195) - 2671013..2671510 (-) 498 WP_001065267.1 glutathione peroxidase -
  SE116_RS13200 (SE116_13200) - 2671520..2671780 (-) 261 WP_014532715.1 hypothetical protein -
  SE116_RS13205 (SE116_13205) - 2672162..2672275 (-) 114 WP_072357681.1 hypothetical protein -
  SE116_RS13210 (SE116_13210) - 2672939..2674938 (-) 2000 Protein_2564 FtsX-like permease family protein -
  SE116_RS13215 (SE116_13215) - 2674935..2675690 (-) 756 WP_000923767.1 ABC transporter ATP-binding protein -
  SE116_RS13220 (SE116_13220) braS 2675798..2676685 (-) 888 WP_319162134.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SE116_RS13225 (SE116_13225) braR 2676696..2677361 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SE116_RS13230 (SE116_13230) - 2677387..2677587 (-) 201 WP_000604725.1 hypothetical protein -
  SE116_RS13235 (SE116_13235) - 2677785..2679209 (+) 1425 WP_000948997.1 alkaline phosphatase -
  SE116_RS13770 - 2679269..2679370 (-) 102 WP_000731972.1 SE2200 family small protein -
  SE116_RS13245 (SE116_13245) - 2679492..2679947 (-) 456 WP_319162136.1 MarR family winged helix-turn-helix transcriptional regulator -
  SE116_RS13250 (SE116_13250) - 2680192..2680953 (-) 762 WP_000323449.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=902180 SE116_RS13220 WP_319162134.1 2675798..2676685(-) (braS) [Staphylococcus aureus strain V315]
MTFLKSITQEIAIVIVVFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFLKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=902180 SE116_RS13220 WP_319162134.1 2675798..2676685(-) (braS) [Staphylococcus aureus strain V315]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTGTTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTTATAGGTATTAAAT
ATTTAAGTTTTTTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986