Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SE087_RS13640 Genome accession   NZ_CP138360
Coordinates   2723619..2724284 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain 17CS1042     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2718619..2729284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS13620 (SE087_13620) - 2719074..2719187 (-) 114 WP_078315476.1 hypothetical protein -
  SE087_RS13625 (SE087_13625) - 2719861..2721861 (-) 2001 WP_204177351.1 ABC transporter permease -
  SE087_RS13630 (SE087_13630) - 2721858..2722613 (-) 756 WP_000923770.1 ABC transporter ATP-binding protein -
  SE087_RS13635 (SE087_13635) braS 2722721..2723608 (-) 888 WP_217175450.1 sensor histidine kinase Regulator
  SE087_RS13640 (SE087_13640) braR 2723619..2724284 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SE087_RS13645 (SE087_13645) - 2724310..2724510 (-) 201 WP_000604725.1 hypothetical protein -
  SE087_RS13650 (SE087_13650) - 2724708..2726132 (+) 1425 WP_319089818.1 alkaline phosphatase -
  SE087_RS14140 - 2726192..2726293 (-) 102 WP_000731972.1 SE2200 family small protein -
  SE087_RS13660 (SE087_13660) - 2726415..2726870 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SE087_RS13665 (SE087_13665) - 2727115..2727876 (-) 762 WP_217175452.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=902139 SE087_RS13640 WP_000697877.1 2723619..2724284(-) (braR) [Staphylococcus aureus strain 17CS1042]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=902139 SE087_RS13640 WP_000697877.1 2723619..2724284(-) (braR) [Staphylococcus aureus strain 17CS1042]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1