Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   SE087_RS13635 Genome accession   NZ_CP138360
Coordinates   2722721..2723608 (-) Length   295 a.a.
NCBI ID   WP_217175450.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 17CS1042     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2717721..2728608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS13605 (SE087_13605) - 2717725..2717817 (+) 93 WP_319089817.1 hypothetical protein -
  SE087_RS13610 (SE087_13610) - 2717925..2718422 (-) 498 WP_001065267.1 glutathione peroxidase -
  SE087_RS13615 (SE087_13615) - 2718432..2718692 (-) 261 WP_011382405.1 hypothetical protein -
  SE087_RS13620 (SE087_13620) - 2719074..2719187 (-) 114 WP_078315476.1 hypothetical protein -
  SE087_RS13625 (SE087_13625) - 2719861..2721861 (-) 2001 WP_204177351.1 ABC transporter permease -
  SE087_RS13630 (SE087_13630) - 2721858..2722613 (-) 756 WP_000923770.1 ABC transporter ATP-binding protein -
  SE087_RS13635 (SE087_13635) braS 2722721..2723608 (-) 888 WP_217175450.1 sensor histidine kinase Regulator
  SE087_RS13640 (SE087_13640) braR 2723619..2724284 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SE087_RS13645 (SE087_13645) - 2724310..2724510 (-) 201 WP_000604725.1 hypothetical protein -
  SE087_RS13650 (SE087_13650) - 2724708..2726132 (+) 1425 WP_319089818.1 alkaline phosphatase -
  SE087_RS14140 - 2726192..2726293 (-) 102 WP_000731972.1 SE2200 family small protein -
  SE087_RS13660 (SE087_13660) - 2726415..2726870 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SE087_RS13665 (SE087_13665) - 2727115..2727876 (-) 762 WP_217175452.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34031.29 Da        Isoelectric Point: 5.8962

>NTDB_id=902138 SE087_RS13635 WP_217175450.1 2722721..2723608(-) (braS) [Staphylococcus aureus strain 17CS1042]
MTFLKSITQEIAIVIVVFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=902138 SE087_RS13635 WP_217175450.1 2722721..2723608(-) (braS) [Staphylococcus aureus strain 17CS1042]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTGTTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTTATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99