Detailed information NTG0902060

Bioinformatically predicted

Overview

• Name: pilJ
• Type: Machinery gene
• Locus tag: SAY89_RS12980
• Genome accession: NZ_CP138348
• Coordinates: 3051197..3053956 (-)
• Length: 919 a.a.
• NCBI ID: WP_320001171.1
• Uniprot ID: -
• Organism: Cyanobacterium aponinum AL20115
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3046197..3058956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAY89_RS12955 (SAY89_12955)	-	3046920..3047552 (+)	633	WP_155084341.1	ribonuclease HII	-
SAY89_RS12960 (SAY89_12960)	-	3047633..3048154 (+)	522	WP_320001168.1	cofactor assembly of complex C subunit B	-
SAY89_RS12965 (SAY89_12965)	-	3048158..3048910 (+)	753	WP_320001169.1	hypothetical protein	-
SAY89_RS12970 (SAY89_12970)	-	3049395..3050270 (-)	876	WP_320001170.1	ion channel	-
SAY89_RS12975 (SAY89_12975)	-	3050325..3051089 (-)	765	WP_099435893.1	MlaE family lipid ABC transporter permease subunit	-
SAY89_RS12980 (SAY89_12980)	pilJ	3051197..3053956 (-)	2760	WP_320001171.1	methyl-accepting chemotaxis protein	Machinery gene
SAY89_RS12985 (SAY89_12985)	-	3054022..3054558 (-)	537	WP_015220733.1	chemotaxis protein CheW	-
SAY89_RS12990 (SAY89_12990)	pilH	3054806..3055171 (-)	366	WP_015220734.1	response regulator transcription factor	Machinery gene
SAY89_RS12995 (SAY89_12995)	hpnH	3055395..3056408 (-)	1014	WP_155084337.1	adenosyl-hopene transferase HpnH	-
SAY89_RS13000 (SAY89_13000)	murA	3056492..3057796 (-)	1305	WP_406584792.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SAY89_RS13005 (SAY89_13005)	ruvX	3058504..3058935 (-)	432	WP_015220737.1	Holliday junction resolvase RuvX	-

Sequence

Protein

• Length: 919 a.a.
• Molecular weight: 101582.80 Da
• Isoelectric Point: 3.8176

>NTDB_id=902060 SAY89_RS12980 WP_320001171.1 3051197..3053956(-) (pilJ) [Cyanobacterium aponinum AL20115]
MVSETDYQERFKQARTAYLEGDLAEASFITDGIMDDYPDDPSAFLLKGHIHLRQQEYDLAQVNYQKVLDLTDHQDLVTLA
KQGLAEIEEDSEDQSLYPPEVEEPDFDDEVEEIGDDDDDNWTSSIQFDSIDWDIDDLEEEEIEDPTLQQNSPFDQSFSKN
SNNPPPTLSKSEKRTEQKKSGDDDEQDEDDTAANFIDPSLDENNFDDDINLDSASNDLLSFDFDNADIDYEQFESDSNDE
DLNQDEMQDTGTPTFVVSSEDEPELSDLEQMLTGETGFLNDLDDDLGDYSSQLEPLTAGKTSTNTGLNLEDDNMPLVPEG
EEDLFFAPDELDDIPDIDADELPVSSIFTKDNKPEQIFPNVIETDENVFDSDFDNEITGSFSFDTDKINLDLEEDISVSS
SLGDISGISSSIAINPEVEVPQGKLAKYYNFSLFTKQLVHGGVTGVVTFVIVLMVSLFQGGGKNIENTSVTTAESGGETT
EQTQETRETQEIPLPFSRTLLLSLIAGISGGASTIAMGYLMTNHIKRYTNDLQNHFESIYQGDYEIKATVYSQDEFGTLA
AGFNQMTKMIYTTTTEARKRAEETERAREDLQRQVIRLLDDVEGASRGDLTVQAEVTADVLGAVADAFNVTITNLRKIVK
QVQQAAVQVNKASTDSEVFARNQSSDALRMAEELAVTLNSVQMMTDSIQRVAENAREAEEVARSSSVTALKGGDAVERTV
AGILQIRETVSETTRKVKRLAEASQQISTIVAVISQISSRTNLLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSL
QEIEQIVLQIQTETGSVMTAMEEGIQQVRDVTERSEQAKRALEDIIQVSNRIDALVRSITADTDEQRENSRGVAKVMQAV
ELTAQATSQESQRVAGSLQNLVGIAKDLISSVERFRVDD

Nucleotide

• Length: 2760 bp

>NTDB_id=902060 SAY89_RS12980 WP_320001171.1 3051197..3053956(-) (pilJ) [Cyanobacterium aponinum AL20115]
ATGGTATCAGAAACCGATTATCAAGAAAGATTTAAACAAGCTCGTACCGCTTATTTAGAAGGAGATTTAGCAGAAGCGTC
CTTCATTACCGATGGTATTATGGATGACTATCCAGATGATCCTAGTGCATTCTTACTAAAAGGTCATATTCATCTACGAC
AACAAGAATATGATTTAGCTCAAGTTAATTATCAAAAAGTCTTGGATTTAACAGATCATCAAGATTTAGTGACATTGGCT
AAACAAGGACTGGCAGAAATAGAAGAAGATAGCGAAGATCAATCTCTGTATCCTCCAGAGGTAGAAGAGCCAGATTTTGA
CGATGAAGTGGAAGAAATCGGTGACGATGATGATGATAATTGGACAAGCAGTATCCAATTTGACAGTATTGATTGGGATA
TAGATGATTTAGAAGAAGAAGAAATAGAAGATCCCACCCTACAGCAAAATTCTCCCTTTGATCAAAGTTTCTCTAAAAAT
TCCAATAATCCTCCTCCCACATTGAGTAAAAGTGAAAAACGCACAGAGCAAAAAAAATCAGGGGATGATGATGAACAGGA
TGAAGATGATACTGCTGCTAATTTTATTGACCCCTCTTTGGACGAAAACAATTTTGACGATGATATAAATTTAGATAGTG
CATCTAATGATTTGTTGAGCTTTGATTTTGATAATGCTGATATAGATTATGAACAGTTTGAAAGTGATTCTAATGATGAA
GATCTAAATCAAGATGAAATGCAAGATACGGGAACTCCCACTTTTGTTGTGTCTAGTGAAGATGAACCTGAATTGAGCGA
TTTAGAACAAATGTTGACGGGGGAGACTGGTTTCCTTAATGATTTAGATGATGACTTGGGAGATTACAGTTCACAGTTAG
AACCTTTAACTGCTGGTAAAACTTCAACTAATACGGGATTAAATTTAGAGGATGATAATATGCCTCTCGTACCCGAAGGA
GAAGAAGATTTATTTTTTGCCCCCGATGAGTTAGATGATATTCCCGACATTGATGCTGATGAGTTGCCAGTTTCGAGCAT
TTTTACAAAGGATAATAAACCAGAGCAAATATTTCCCAATGTTATAGAAACAGATGAGAATGTTTTTGATAGTGATTTTG
ATAATGAAATTACGGGGAGTTTTTCCTTTGATACAGATAAAATTAATTTAGATTTGGAAGAAGATATAAGTGTTTCTTCT
TCTTTAGGAGATATTTCTGGCATATCCTCGTCTATTGCTATTAATCCAGAAGTAGAAGTTCCCCAAGGAAAACTTGCCAA
ATATTATAATTTTTCCCTATTCACTAAACAATTAGTACATGGTGGTGTTACAGGAGTTGTTACTTTTGTGATTGTGTTAA
TGGTAAGTTTGTTTCAAGGGGGAGGTAAGAATATAGAAAATACAAGTGTGACGACTGCTGAATCTGGAGGAGAAACGACC
GAACAAACTCAAGAAACAAGGGAAACTCAAGAAATACCATTGCCTTTTTCTCGGACATTGTTGTTAAGTTTAATCGCTGG
TATTAGTGGTGGAGCTTCTACCATTGCAATGGGTTATTTGATGACTAATCACATTAAACGCTATACCAATGACTTGCAAA
ATCACTTTGAATCCATTTATCAGGGTGATTATGAGATAAAAGCAACGGTTTATTCTCAAGATGAGTTTGGTACTTTAGCT
GCTGGTTTTAATCAGATGACAAAAATGATTTATACCACTACCACAGAGGCGAGAAAGAGGGCTGAAGAGACGGAGAGAGC
AAGGGAGGATTTACAAAGACAGGTTATTCGTCTTCTTGATGATGTGGAAGGAGCTTCTAGGGGTGATTTAACGGTACAAG
CTGAGGTAACAGCAGACGTATTAGGGGCGGTAGCGGATGCTTTCAACGTGACTATTACTAACTTGCGGAAAATCGTTAAA
CAGGTACAACAGGCGGCGGTACAGGTTAACAAAGCAAGTACTGATAGTGAGGTGTTTGCTCGTAATCAATCGAGTGATGC
GTTGCGGATGGCGGAAGAATTGGCCGTTACGTTAAATTCTGTTCAGATGATGACAGATTCAATTCAGAGGGTGGCAGAAA
ACGCCAGAGAAGCGGAAGAGGTGGCCCGTTCCTCTAGTGTTACGGCTTTAAAGGGTGGTGATGCGGTAGAAAGAACTGTT
GCTGGTATTTTGCAGATTAGGGAAACAGTGTCAGAAACAACCCGAAAGGTAAAAAGATTGGCAGAGGCATCCCAACAAAT
TTCAACGATTGTGGCTGTTATTTCTCAGATTTCTTCTCGTACCAACCTATTAGCTTTAAATGCTTCTATTCAGGCCGCAA
GAGCAGGAGAGGCGGGGAGAGGATTTGCGATCGTTGCTGATGAGGTACGACAGTTAGCAGATAGGTCAGCAAAATCCTTG
CAAGAAATTGAACAAATTGTATTACAAATTCAAACAGAAACTGGTTCGGTTATGACGGCGATGGAAGAGGGTATTCAACA
GGTAAGAGATGTAACCGAGAGGTCTGAACAGGCAAAACGGGCATTGGAAGATATTATTCAAGTGTCCAATCGTATTGATG
CCTTGGTGCGATCGATTACAGCAGATACTGATGAGCAGAGAGAAAATTCCCGAGGGGTAGCAAAAGTAATGCAGGCGGTT
GAATTGACAGCTCAGGCAACTTCTCAAGAATCTCAGAGAGTAGCTGGTTCTTTGCAAAATTTGGTGGGCATTGCCAAAGA
TTTAATTTCCTCTGTGGAACGTTTTAGGGTTGATGATTAG

Domains

Predicted by InterproScan.

• Methyl-accepting chemotaxis protein (MCP) signalling domain (MCPsignal) (700-881)

• HAMP domain (HAMP) (521-570)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilJ	Synechocystis sp. PCC 6803	47.246	100	0.485