Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | TthTMY_RS11620 | Genome accession | NZ_AP025158 |
| Coordinates | 2144961..2145269 (+) | Length | 102 a.a. |
| NCBI ID | WP_172844695.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TMY | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2139961..2150269
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TthTMY_RS11590 (TthTMY_23000) | - | 2140924..2141388 (+) | 465 | WP_096411354.1 | hypothetical protein | - |
| TthTMY_RS11595 (TthTMY_23010) | pfkA | 2141365..2142333 (-) | 969 | WP_096411355.1 | 6-phosphofructokinase | - |
| TthTMY_RS11600 (TthTMY_23020) | rsmI | 2142330..2143124 (-) | 795 | WP_096411356.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| TthTMY_RS11605 (TthTMY_23030) | - | 2143126..2143620 (-) | 495 | WP_096411357.1 | hypothetical protein | - |
| TthTMY_RS11610 (TthTMY_23040) | - | 2143784..2144311 (-) | 528 | WP_096411358.1 | inorganic diphosphatase | - |
| TthTMY_RS11615 (TthTMY_23050) | - | 2144344..2144988 (+) | 645 | WP_096411359.1 | YcxB family protein | - |
| TthTMY_RS11620 | comEA | 2144961..2145269 (+) | 309 | WP_172844695.1 | ComEA family DNA-binding protein | Machinery gene |
| TthTMY_RS11625 (TthTMY_23070) | comA/comEC | 2145266..2147299 (+) | 2034 | WP_096411361.1 | ComEC/Rec2 family competence protein | Machinery gene |
| TthTMY_RS11630 (TthTMY_23080) | - | 2147287..2148096 (-) | 810 | WP_096411362.1 | ParB/RepB/Spo0J family partition protein | - |
| TthTMY_RS11635 (TthTMY_23090) | soj | 2148080..2148829 (-) | 750 | WP_096411363.1 | chromosome-partitioning ATPase Soj | - |
| TthTMY_RS11640 (TthTMY_23100) | rsmG | 2148823..2149572 (-) | 750 | WP_096411364.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10919.18 Da Isoelectric Point: 10.0365
>NTDB_id=90179 TthTMY_RS11620 WP_172844695.1 2144961..2145269(+) (comEA) [Thermus thermophilus strain TMY]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLAQRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLAQRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=90179 TthTMY_RS11620 WP_172844695.1 2144961..2145269(+) (comEA) [Thermus thermophilus strain TMY]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAAGCCCTGGGAAAGGTTGCCCCTTTGCCCCAAGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCAGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAGGGGATCGGCCCCGCCACCCTAGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAAGCCCTGGGAAAGGTTGCCCCTTTGCCCCAAGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCAGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAGGGGATCGGCCCCGCCACCCTAGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |