Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SC043_RS11255 Genome accession   NZ_CP138309
Coordinates   2204183..2205469 (-) Length   428 a.a.
NCBI ID   WP_023349183.1    Uniprot ID   -
Organism   Lactococcus lactis strain B26     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2199183..2210469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SC043_RS11240 (SC043_11240) - 2200374..2200910 (-) 537 WP_010906322.1 hypothetical protein -
  SC043_RS11245 (SC043_11245) - 2200916..2202247 (-) 1332 WP_010906323.1 FAD/NAD(P)-binding oxidoreductase -
  SC043_RS11250 (SC043_11250) - 2202263..2204113 (-) 1851 WP_010906324.1 proline--tRNA ligase -
  SC043_RS11255 (SC043_11255) eeP 2204183..2205469 (-) 1287 WP_023349183.1 RIP metalloprotease RseP Regulator
  SC043_RS11260 (SC043_11260) - 2205488..2206291 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  SC043_RS11265 (SC043_11265) - 2206291..2207025 (-) 735 WP_010906326.1 isoprenyl transferase -
  SC043_RS11270 (SC043_11270) yajC 2207397..2207729 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  SC043_RS11275 (SC043_11275) - 2207824..2208521 (-) 698 Protein_2196 DNA alkylation repair protein -
  SC043_RS11280 (SC043_11280) rlmH 2208540..2209019 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SC043_RS11285 (SC043_11285) - 2209058..2210005 (-) 948 WP_003130410.1 IS30 family transposase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46466.96 Da        Isoelectric Point: 6.2657

>NTDB_id=901730 SC043_RS11255 WP_023349183.1 2204183..2205469(-) (eeP) [Lactococcus lactis strain B26]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSDGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=901730 SC043_RS11255 WP_023349183.1 2204183..2205469(-) (eeP) [Lactococcus lactis strain B26]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCCATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGACGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.381

100

0.568

  eeP Streptococcus thermophilus LMD-9

56.148

100

0.565