Detailed information NTG0901405

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SC192_RS14055
• Genome accession: NZ_CP138205
• Coordinates: 2965914..2967032 (+)
• Length: 372 a.a.
• NCBI ID: WP_348897798.1
• Uniprot ID: A0AB39JXG0
• Organism: Acinetobacter sp. 2019-01-05
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2960914..2972032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SC192_RS14040 (SC192_14055)	-	2963080..2963922 (-)	843	WP_348897800.1	undecaprenyl-diphosphate phosphatase	-
SC192_RS14045 (SC192_14060)	-	2964030..2964722 (-)	693	WP_348897799.1	YggS family pyridoxal phosphate-dependent enzyme	-
SC192_RS14050 (SC192_14065)	pilT	2964849..2965886 (+)	1038	WP_107972265.1	type IV pilus twitching motility protein PilT	Machinery gene
SC192_RS14055 (SC192_14070)	pilU	2965914..2967032 (+)	1119	WP_348897798.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
SC192_RS14060 (SC192_14075)	fur	2967102..2967539 (-)	438	WP_309456688.1	ferric iron uptake transcriptional regulator	-
SC192_RS14065 (SC192_14080)	-	2967651..2968049 (+)	399	WP_348897797.1	outer membrane protein assembly factor BamE	-
SC192_RS14070 (SC192_14085)	-	2968105..2968428 (-)	324	WP_348897796.1	RnfH family protein	-
SC192_RS14075 (SC192_14090)	-	2968428..2969495 (-)	1068	WP_348897795.1	hypothetical protein	-
SC192_RS14080 (SC192_14095)	-	2969648..2970103 (-)	456	WP_044099926.1	bacteriohemerythrin	-
SC192_RS14085 (SC192_14100)	-	2970354..2971202 (-)	849	WP_348897794.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41939.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=901405 SC192_RS14055 WP_348897798.1 2965914..2967032(+) (pilU) [Acinetobacter sp. 2019-01-05]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPSVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHSSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLANEGPDQITDEKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=901405 SC192_RS14055 WP_348897798.1 2965914..2967032(+) (pilU) [Acinetobacter sp. 2019-01-05]
ATGGATTTTAATGACTTACTCAACCTCATGGTTGAGAAAAAATCATCGGATCTTTTTATTACCGATGGTGTTGCACCATC
TATGAAAATTAATGGTCAAATTGTTCCAATTTCGAAAAATAGCCTTTCAGGCGAAGTGATTGGTCAACTCTTACATTCCA
TTATGAGCGAAAAACAGCGCAAAGAATTTGCAGAGACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACGGCA
CGTTTTCGTGTGAGTGCTTTTCAGCAACGCGACATGCCCGGCATGGTTCTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGATTTACAGCTACCATCTGTACTGAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCAACAG
GTACAGGTAAATCAACTTCATTGGCTTCAATGATCAGCCATCGTAACCACAGCTCTAAAGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCATGAACATGCAGGCTGCATCATTACTCAACGTGAAGTCGGTATCGATACAGACTCATTCGA
AATTGCCTTAAAAAATACATTACGACAAGCACCAGATGTCATCTTAATTGGGGAAATTCGTTCTCGTGAAGTCATGGACT
ATGCAATTGGCTTTGCTGAAACAGGCCACCTTGTATTAGCCACAATGCACGCCAACAACGCCAACCAAGCACTCGACCGT
ATTATTCACTTCTTTGAAAGTGACCGTCATAGCCAGCTCTACATGGACTTATCGCTAAACTTAAAGGCCATGATTGCCCA
GCAGCTTATTCCAACACCAGATGGCAATTCACGCCGAGCGGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ATATCCGTAAAGGCGAAATTCATGAAATTAAAGACTTGATGAAACGCTCACGTGAACTGGGTATGCAGACATTTGACCAA
GCTTTATTTGATTTATATAAAGCAGGTCAAATTACATATAAAGATGCGCTTAAACATGCCGACTCGCCAAACGATTTACG
CTTAACCATTAAGCTTGCAAATGAAGGCCCAGATCAAATAACAGACGAAAAACAGCATTTAACTTTCGATCGTCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.132	100	0.763
pilU	Pseudomonas stutzeri DSM 10701	68.194	99.731	0.68
pilU	Vibrio cholerae strain A1552	53.514	99.462	0.532
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.254	95.43	0.403
pilT	Legionella pneumophila strain Lp02	39.645	90.86	0.36
pilT	Legionella pneumophila strain ERS1305867	39.645	90.86	0.36