Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   SA286_RS05550 Genome accession   NZ_CP137888
Coordinates   1117471..1118436 (+) Length   321 a.a.
NCBI ID   WP_017360174.1    Uniprot ID   A0A6I5SIG8
Organism   Bacillus altitudinis strain ECC22     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1112471..1123436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA286_RS05520 (SA286_05520) argF 1112794..1113744 (+) 951 WP_008348520.1 ornithine carbamoyltransferase -
  SA286_RS05525 (SA286_05525) - 1113848..1114027 (+) 180 WP_008348517.1 YjzC family protein -
  SA286_RS05530 (SA286_05530) - 1114197..1115462 (+) 1266 WP_100324880.1 MFS transporter -
  SA286_RS05535 (SA286_05535) - 1115582..1115776 (-) 195 WP_008348514.1 YjzD family protein -
  SA286_RS05540 (SA286_05540) - 1115989..1116729 (+) 741 WP_007499048.1 hypothetical protein -
  SA286_RS05545 (SA286_05545) - 1116805..1117380 (+) 576 WP_148944618.1 nad binding enzyme -
  SA286_RS05550 (SA286_05550) med 1117471..1118436 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  SA286_RS05555 (SA286_05555) comZ 1118448..1118645 (+) 198 WP_008348507.1 ComZ family protein Regulator
  SA286_RS05560 (SA286_05560) - 1118656..1118889 (-) 234 WP_008348506.1 hypothetical protein -
  SA286_RS05565 (SA286_05565) - 1119059..1119997 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  SA286_RS05570 (SA286_05570) fabF 1120019..1121260 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  SA286_RS05575 (SA286_05575) - 1121338..1122132 (+) 795 WP_041507466.1 DUF2268 domain-containing protein -
  SA286_RS05580 (SA286_05580) - 1122303..1123283 (+) 981 WP_056407962.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35889.89 Da        Isoelectric Point: 5.9297

>NTDB_id=901020 SA286_RS05550 WP_017360174.1 1117471..1118436(+) (med) [Bacillus altitudinis strain ECC22]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=901020 SA286_RS05550 WP_017360174.1 1117471..1118436(+) (med) [Bacillus altitudinis strain ECC22]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCCGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATTATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I5SIG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632