Detailed information NTG0090099

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: LDP65_RS17395
• Genome accession: NZ_AP025152
• Coordinates: 3858373..3858885 (-)
• Length: 170 a.a.
• NCBI ID: WP_101114082.1
• Uniprot ID: A0AAV5NW88
• Organism: Vibrio penaeicida strain TUMSAT-OK1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3853373..3863885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDP65_RS17380	aroB	3854791..3855879 (-)	1089	WP_104400116.1	3-dehydroquinate synthase	-
LDP65_RS17385	aroK	3855902..3856420 (-)	519	WP_101114086.1	shikimate kinase AroK	-
LDP65_RS17390	pilQ	3856609..3858327 (-)	1719	WP_399481255.1	type IV pilus secretin PilQ	Machinery gene
LDP65_RS17395	pilP	3858373..3858885 (-)	513	WP_101114082.1	pilus assembly protein PilP	Machinery gene
LDP65_RS17400	pilO	3858878..3859465 (-)	588	WP_101114080.1	type 4a pilus biogenesis protein PilO	Machinery gene
LDP65_RS17405	pilN	3859462..3860022 (-)	561	WP_126606771.1	PilN domain-containing protein	Machinery gene
LDP65_RS17410	pilM	3860015..3861031 (-)	1017	WP_126606772.1	type IV pilus assembly protein PilM	Machinery gene
LDP65_RS17415	-	3861176..3863671 (+)	2496	WP_126606773.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 170 a.a.
• Molecular weight: 18570.84 Da
• Isoelectric Point: 10.7318

>NTDB_id=90099 LDP65_RS17395 WP_101114082.1 3858373..3858885(-) (pilP) [Vibrio penaeicida strain TUMSAT-OK1]
MNKPLMALVAIAALSGCRANHEPLQDFILKTQANASTQVSKLQAEQSFKASEYVPVTARVPFALPKIAVVETQPSLVKDC
WQPASRRKNGKLERFALTQLKLKGVMGSGKKVSGIIQVPDGHVVKVKQGHYLGLNNGKVINITPKHLTIQETLPDGLGCW
QQRNVKLALK

Nucleotide

• Length: 513 bp

>NTDB_id=90099 LDP65_RS17395 WP_101114082.1 3858373..3858885(-) (pilP) [Vibrio penaeicida strain TUMSAT-OK1]
ATGAATAAGCCGCTGATGGCACTGGTCGCAATTGCAGCTTTAAGCGGTTGTCGTGCCAACCACGAACCGCTTCAGGACTT
TATTTTAAAGACACAAGCCAACGCGTCTACGCAAGTATCCAAGCTTCAAGCAGAGCAGTCGTTTAAGGCCAGTGAATATG
TGCCAGTAACGGCACGTGTTCCTTTTGCTTTACCCAAAATTGCGGTTGTTGAAACCCAACCATCTTTGGTTAAAGACTGT
TGGCAACCAGCCTCCCGAAGGAAGAATGGGAAATTAGAAAGGTTTGCTCTCACTCAACTCAAGTTAAAAGGGGTCATGGG
AAGCGGCAAAAAGGTGTCGGGCATTATTCAAGTCCCTGATGGTCATGTCGTCAAGGTAAAGCAGGGACATTACCTTGGTT
TAAACAATGGCAAGGTAATCAACATTACTCCAAAGCACCTGACGATTCAGGAAACACTACCTGATGGGCTTGGGTGTTGG
CAGCAGCGTAACGTGAAGCTCGCATTGAAATAA

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (24-169)

• Prokaryotic membrane lipoprotein lipid attachment site (LPAM_1) (1-17)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	53.846	99.412	0.535
pilP	Vibrio cholerae strain A1552	51.765	100	0.518