Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   R2B76_RS17120 Genome accession   NZ_CP137800
Coordinates   3324681..3325631 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain Y18-01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3319681..3330631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2B76_RS17095 (R2B76_17100) - 3319827..3320339 (-) 513 WP_318614505.1 DUF3231 family protein -
  R2B76_RS17100 (R2B76_17105) - 3320630..3321472 (-) 843 WP_318614507.1 manganese catalase family protein -
  R2B76_RS17105 (R2B76_17110) - 3322009..3322965 (-) 957 WP_318614509.1 siderophore ABC transporter substrate-binding protein -
  R2B76_RS17110 (R2B76_17115) - 3322989..3323747 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  R2B76_RS17115 (R2B76_17120) - 3323741..3324688 (-) 948 WP_074895049.1 iron chelate uptake ABC transporter family permease subunit -
  R2B76_RS17120 (R2B76_17125) ceuB 3324681..3325631 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  R2B76_RS17125 (R2B76_17130) - 3325950..3326756 (-) 807 WP_013057892.1 cell wall hydrolase -
  R2B76_RS17130 (R2B76_17135) - 3327119..3327373 (+) 255 WP_013057893.1 hypothetical protein -
  R2B76_RS17135 (R2B76_17140) - 3327449..3327613 (-) 165 WP_318614517.1 hypothetical protein -
  R2B76_RS17140 (R2B76_17145) - 3327940..3328503 (-) 564 WP_074895052.1 NAD(P)H-dependent oxidoreductase -
  R2B76_RS17145 (R2B76_17150) lepB 3328795..3329355 (-) 561 WP_025751067.1 signal peptidase I -
  R2B76_RS17150 (R2B76_17155) - 3329439..3329795 (-) 357 WP_075420999.1 DUF4440 domain-containing protein -
  R2B76_RS17155 (R2B76_17160) - 3329897..3330442 (-) 546 WP_075421000.1 CBO0543 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=900720 R2B76_RS17120 WP_013057891.1 3324681..3325631(-) (ceuB) [Priestia megaterium strain Y18-01]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=900720 R2B76_RS17120 WP_013057891.1 3324681..3325631(-) (ceuB) [Priestia megaterium strain Y18-01]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTCAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGGCTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTTAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACTTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTTCCATATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5