Detailed information NTG0900288

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ABG803_RS16115
• Genome accession: NZ_CP156930
• Coordinates: 3516786..3518066 (-)
• Length: 426 a.a.
• NCBI ID: WP_347914429.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 2024CK-00356
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3511786..3523066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG803_RS16105 (ABG803_16110)	hupB	3513850..3514122 (-)	273	WP_003087931.1	nucleoid-associated protein HU-beta	-
ABG803_RS16110 (ABG803_16115)	lon	3514258..3516654 (-)	2397	WP_347914428.1	endopeptidase La	-
ABG803_RS16115 (ABG803_16120)	clpX	3516786..3518066 (-)	1281	WP_347914429.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ABG803_RS16120 (ABG803_16125)	clpP	3518171..3518812 (-)	642	WP_003098129.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ABG803_RS16125 (ABG803_16130)	tig	3518906..3520216 (-)	1311	WP_124783412.1	trigger factor	-
ABG803_RS16130 (ABG803_16135)	parR	3520448..3521155 (+)	708	WP_347914430.1	response regulator transcription factor ParR	-
ABG803_RS16135 (ABG803_16140)	parS	3521156..3522442 (+)	1287	WP_003087912.1	sensor histidine kinase ParS	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46931.74 Da
• Isoelectric Point: 4.8347

>NTDB_id=900288 ABG803_RS16115 WP_347914429.1 3516786..3518066(-) (clpX) [Pseudomonas aeruginosa strain 2024CK-00356]
MTDTRNGEDNGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEVQEAQAESSGHKLPAPKEIRTILDQYVI
GQERAKKVLAVAVYNHYKRLNQRDKKDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE
NIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVD
TRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGEAFKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEA
ALMQILTEPKNALTKQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMCEIPSQQDVSKVVIDE
SVIDGSSQPLMIYENSEKPAKAAPEA

Nucleotide

• Length: 1281 bp

>NTDB_id=900288 ABG803_RS16115 WP_347914429.1 3516786..3518066(-) (clpX) [Pseudomonas aeruginosa strain 2024CK-00356]
ATGACTGATACCCGCAACGGCGAGGACAACGGCAAGCTGCTGTATTGCTCCTTCTGCGGCAAGAGCCAGCACGAAGTGCG
CAAGTTGATTGCCGGCCCCTCGGTCTTTATCTGCGACGAGTGTGTCGACCTGTGCAATGACATCATCCGCGAGGAGGTGC
AGGAAGCGCAGGCGGAAAGTAGTGGGCACAAACTTCCGGCGCCGAAAGAGATCCGCACCATCCTCGATCAGTACGTGATC
GGGCAGGAGCGGGCCAAGAAGGTTCTGGCGGTAGCGGTATACAACCACTACAAGCGCCTCAACCAGCGTGACAAGAAGGA
CGATATCGAGCTCGGCAAGAGCAACATTCTGATGATCGGCCCAACCGGCTCGGGCAAGACCCTGCTGGCCGAGACCCTCG
CACGTCTGCTGAACGTGCCGTTCACCATCGCCGATGCGACCACGCTGACGGAAGCGGGCTACGTGGGCGAGGATGTCGAG
AACATCATCCAGAAACTCTTGCAGAAGTGCGATTACGATGTGGAGAAGGCCCAGATGGGCATCGTCTACATCGACGAGAT
CGACAAGATTTCCCGGAAATCGGACAACCCCTCCATCACTCGCGACGTCTCCGGCGAGGGTGTGCAGCAGGCCCTGCTGA
AGCTCATCGAGGGTACCGTTGCCTCGGTACCGCCGCAGGGCGGTCGCAAGCATCCGCAGCAGGAGTTCCTGCAGGTCGAT
ACGCGCAACATCCTGTTCATCTGCGGCGGTGCTTTCGCCGGTCTGGAGCGGGTCATCCAGAACCGTTCCGCGCGCGGCGG
CATCGGTTTCAATGCCGAAGTGCGCAGTCAGGAGATGGGCAAGAAGGTCGGCGAGGCGTTCAAGGAAGTCGAACCGGAAG
ATCTCGTCAAGTTCGGTCTTATTCCCGAGTTTGTAGGGCGTTTGCCGGTGATCGCGACTCTTGATGAGCTCGACGAGGCT
GCGCTCATGCAGATCCTGACCGAGCCGAAGAACGCTCTCACCAAGCAGTACGCCAAGCTGTTCGAAATGGAAGGCGTCGA
TCTCGAATTCCGTCCGGACGCACTCAAGGCGGTTGCCCGCAAGGCGCTCGAACGCAAGACCGGTGCACGTGGCTTGCGTT
CAATTCTCGAAGGTATCCTTCTCGATACCATGTGCGAGATTCCCTCCCAGCAGGATGTCAGCAAGGTGGTCATCGATGAG
AGTGTCATCGATGGCTCGTCGCAACCCCTGATGATCTACGAGAACAGCGAAAAGCCAGCCAAGGCTGCGCCTGAGGCATG
A

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• AAA domain (Cdc48 subfamily) (AAA_2) (113-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	60.934	95.54	0.582
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.198	94.836	0.523