Detailed information NTG0900086

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: R6I06_RS02040
• Genome accession: NZ_CP137711
• Coordinates: 400329..401477 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis isolate FELIX_MS886
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 395329..406477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6I06_RS02020 (R6I06_02020)	yclH	395706..396386 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
R6I06_RS02025 (R6I06_02025)	yclI	396402..397862 (-)	1461	WP_003234506.1	ABC transporter permease	-
R6I06_RS02030 (R6I06_02030)	yclJ	398075..398758 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
R6I06_RS02035 (R6I06_02035)	yclK	398745..400166 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
R6I06_RS02040 (R6I06_02040)	rapC	400329..401477 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
R6I06_RS02045 (R6I06_02045)	phrC	401461..401583 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
R6I06_RS02050 (R6I06_02050)	yczM	401683..401772 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
R6I06_RS02055 (R6I06_02055)	yczN	401854..401967 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
R6I06_RS02060 (R6I06_02060)	thrD	402121..403485 (-)	1365	WP_009966541.1	aspartate kinase	-
R6I06_RS02065 (R6I06_02065)	ceuB	403870..404820 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
R6I06_RS02070 (R6I06_02070)	yclO	404813..405760 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=900086 R6I06_RS02040 WP_003246686.1 400329..401477(+) (rapC) [Bacillus subtilis isolate FELIX_MS886]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=900086 R6I06_RS02040 WP_003246686.1 400329..401477(+) (rapC) [Bacillus subtilis isolate FELIX_MS886]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571