Detailed information NTG0899721

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: R6Y88_RS08810
• Genome accession: NZ_CP137687
• Coordinates: 1731115..1732263 (-)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus subtilis strain YT-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1726115..1737263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6Y88_RS08780	yclO	1726833..1727780 (-)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-
R6Y88_RS08785	ceuB	1727773..1728723 (-)	951	WP_015382768.1	petrobactin ABC transporter permease YclN	Machinery gene
R6Y88_RS08790	thrD	1729108..1730472 (+)	1365	WP_015382767.1	aspartate kinase	-
R6Y88_RS08795	yczN	1730625..1730738 (+)	114	WP_014478831.1	YjcZ family sporulation protein	-
R6Y88_RS08800	yczM	1730820..1730909 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
R6Y88_RS08805	phrC	1731009..1731131 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
R6Y88_RS08810	rapC	1731115..1732263 (-)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
R6Y88_RS08815	yclK	1732427..1733848 (-)	1422	WP_080030630.1	two-component system sensor histidine kinase YclK	-
R6Y88_RS08820	yclJ	1733835..1734518 (-)	684	WP_015482792.1	two-component system response regulator YclJ	-
R6Y88_RS08825	yclI	1734731..1736191 (+)	1461	WP_015382763.1	ABC transporter permease	-
R6Y88_RS08830	yclH	1736207..1736887 (+)	681	WP_015382762.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=899721 R6Y88_RS08810 WP_014475800.1 1731115..1732263(-) (rapC) [Bacillus subtilis strain YT-4]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=899721 R6Y88_RS08810 WP_014475800.1 1731115..1732263(-) (rapC) [Bacillus subtilis strain YT-4]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
CTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTATTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568