Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABEG41_RS00220 Genome accession   NZ_CP155795
Coordinates   41171..41998 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain D137     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36171..46998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEG41_RS00195 (ABEG41_00195) yaaO 37234..38676 (+) 1443 WP_015715092.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ABEG41_RS00200 (ABEG41_00200) tmk 38673..39311 (+) 639 WP_015715093.1 dTMP kinase -
  ABEG41_RS00205 (ABEG41_00205) darA 39385..39714 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ABEG41_RS00210 (ABEG41_00210) yaaR 39727..40167 (+) 441 WP_015715094.1 YaaR family protein -
  ABEG41_RS00215 (ABEG41_00215) holB 40179..41168 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ABEG41_RS00220 (ABEG41_00220) yaaT 41171..41998 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ABEG41_RS00225 (ABEG41_00225) yabA 42013..42372 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ABEG41_RS00230 (ABEG41_00230) trmNF 42431..43174 (+) 744 WP_015715095.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ABEG41_RS00235 (ABEG41_00235) yazA 43161..43460 (+) 300 WP_019712966.1 GIY-YIG nuclease family protein -
  ABEG41_RS00240 (ABEG41_00240) rsmI 43435..44313 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABEG41_RS00245 (ABEG41_00245) abrB 44362..44652 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=898783 ABEG41_RS00220 WP_003226767.1 41171..41998(+) (yaaT) [Bacillus subtilis strain D137]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=898783 ABEG41_RS00220 WP_003226767.1 41171..41998(+) (yaaT) [Bacillus subtilis strain D137]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996